Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq72 82.4 9e-11 seq33 82.4 9e-11 >seq72 Length=122406 Score = 82.4 bits (90), Expect = 9e-11 Identities = 167/243 (69%), Gaps = 4/243 (2%) Strand=Plus/Minus Query 24127 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 24186 ||| || |||||||| || ||||||||||||||| | || | |||||| | Sbjct 112918 ACAGCAGGCATGCGAAGTCCGTGTGTAGACCCTCGTCGCGCGAGATGAGCTCGTTGCTGA 112859 Query 24187 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGATCCA 24245 |||| || || ||||| || || ||||| || ||||| || | | |||| || || || Sbjct 112858 ACGTCAGCCCTGGCATCAGACCGCGCTTCTTCAGCCAGAACAGCG-CGCAGAACGACCCG 112800 Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTG 24305 ||||||||||| || || || || |||||| | || || | || | | | |||||| Sbjct 112799 GAAAAGAAAATGCCCTCCACCGCGGCAAAGCCGATCAGCCGCTCCTGAAAGCTCGCGCTG 112740 Query 24306 -TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTAT 24364 || | |||||| ||||| || |||||||| | | || || || |||| ||| Sbjct 112739 CTCCCG-ATCCACCGCACGGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGTAT 112681 Query 24365 AGC 24367 || Sbjct 112680 CGC 112678 >seq33 Length=364854 Score = 82.4 bits (90), Expect = 9e-11 Identities = 167/243 (69%), Gaps = 4/243 (2%) Strand=Plus/Plus Query 24127 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 24186 ||| || |||||||| || ||||||||||||||| | || | |||||| | Sbjct 190421 ACAGCAGGCATGCGAAGTCCGTGTGTAGACCCTCGTCGCGCGAGATGAGCTCGTTGCTGA 190480 Query 24187 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGATCCA 24245 |||| || || ||||| || || ||||| || ||||| || | | |||| || || || Sbjct 190481 ACGTCAGCCCTGGCATCAGACCGCGCTTCTTCAGCCAGAACA-GCGCGCAGAACGACCCG 190539 Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTG 24305 ||||||||||| || || || || |||||| | || || | || | | | |||||| Sbjct 190540 GAAAAGAAAATGCCCTCCACCGCGGCAAAGCCGATCAGCCGCTCCTGAAAGCTCGCGCTG 190599 Query 24306 -TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTAT 24364 || | |||||| ||||| || |||||||| | | || || || |||| ||| Sbjct 190600 CTCCCG-ATCCACCGCACGGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGTAT 190658 Query 24365 AGC 24367 || Sbjct 190659 CGC 190661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593719106369280