Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq63 208 9e-49 >seq63 Length=164469 Score = 208 bits (230), Expect = 9e-49 Identities = 462/684 (68%), Gaps = 27/684 (4%) Strand=Plus/Plus Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGG 145731 ||||| ||| |||| || ||||||||| |||||||||| ||||| || ||| ||| Sbjct 126551 AGCTGCGCCTTGAGGGCATCAACGTGGTTGCGGTAGACGTGGGCGTCGCCGAGGGTGTGC 126610 Query 145732 ATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAG 145791 | | || || ||| || ||||| | ||| | | | ||| ||||| | |||| Sbjct 126611 ACAAGCTCACCAGGCCGCAGACCCGTCGCCTTGGCAATGAGGATGGTGAGCAGCGCGTAG 126670 Query 145792 CTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851 ||| ||||||||||| || || || |||||||| | |||||||||||||| | |||| Sbjct 126671 GAGGCGATGTTGAAGGGGACGCCAAGACCCATGTCGCACGAGCGCTGGTACAACATGCAG 126730 Query 145852 GAGAGCTC---CCCGCCCG---CCACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAG 145904 || ||||| | | | | |||||||||||| ||| || | |||||| |||||||| Sbjct 126731 GATAGCTCGCTCGTGTCTGTGTTCACGTAGAACTGAGCA-AGCAAGTGGCACGGCGGCAG 126789 Query 145905 GGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGG 145964 ||||| |||| | |||||||||||| |||| | ||| | | | | || Sbjct 126790 CGCCATCTTTTGCAGCGCGCACGGGTTCCAGGCAGTGACCAGGAGGCGGCGGTCGTTCGG 126849 Query 145965 GTTCCTCTTGA---TCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTA 146021 |||| ||||| ||||| | || || | ||| ||||||||| || | || ||| Sbjct 126850 GTTCGCCTTGATGGTCTCCACGATGAG---CTTGATCTGGTCCACCCCTTCGCCGTCGTA 126906 Query 146022 ATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGG 146081 | | || | || ||| | ||||||||||| | ||||||||| |||||||| || Sbjct 126907 GTTCGCCTCAAACCCCTTGTAATCTGCCCCGAAGTGGCGCCACTGGAAGCCGTAGACAGG 126966 Query 146082 CCCCAGGTCC----CCGGGCTCCCTGTGCCCCAGCC-CGGCCCGGGCGAGGAAGTCCCGG 146136 || |||||| || || |||| | |||| ||| | | |||| || || || Sbjct 126967 GCCGAGGTCCATCTCCTTATTCTCTGT---CAAGCCGCGG--CTGTCGAGAAACTCGCGC 127021 Query 146137 GACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGAC 146196 || |||||| |||||||||| | | | || | | | ||| | | ||| | Sbjct 127022 GAGCCGTTGCCGTCCCAGATGTGAATGTCCTTGTCTGCCAGCAGCTGCGCACTCGTCTCC 127081 Query 146197 CCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTC 146256 || | | |||||| |||||||| ||| || || | ||||||||| | ||| || ||| Sbjct 127082 CCGCGCAGGAACCACAGCAGCTCCTCGCACACGCCGCGCCAGAAGACACGCTTCGTCGTC 127141 Query 146257 AGCAGGG---GGAACTGGCCCCGCAGGGAGTACTTGGCCTGGTCCCCGAAGACGGACAGG 146313 ||||| | || | | | ||||||||| | |||| | ||||||| | | | Sbjct 127142 AGCAGCGGCAGGCGGTTGTCGCGCAGGGAGAAGCGCATCTGGGCGCCGAAGAGGCCGATG 127201 Query 146314 GTGCCCACGCCCGTCCTGTCCCCC 146337 ||||||||||| || | |||| || Sbjct 127202 GTGCCCACGCCGGTGCGGTCCTCC 127225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590074321677440