Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq72 116 8e-21 seq33 102 2e-16 >seq72 Length=122406 Score = 116 bits (128), Expect = 8e-21 Identities = 361/546 (66%), Gaps = 26/546 (5%) Strand=Plus/Minus Query 157244 ACCCCGGGCTTGCTGTACTCGGCCACTCTATTCTCAAAAAAGTTGGTCTTTCCCTGGAGA 157303 || |||| ||| |||||| |||| || ||||| || ||||| || || ||||| ||| Sbjct 113213 ACGCCGGCCTTCTGGTACTCCCCCACCCTCTTCTCGAAGAAGTTCGTTTTGCCCTGCAGA 113154 Query 157304 GAAATCATGTCCATCCACTCGAATGGGTTGGCGCAGTTGTACACCTTGTCGTACCCCAGC 157363 || ||||| ||||| | |||||||| | | ||| ||| ||| || | || ||| Sbjct 113153 GAGATCATCTCCATGAAGTCGAATGGCTGCGTCGAGTGGTAGTGCTTCTCCTCGCCGAGC 113094 Query 157364 TGGTTCAGCCAGTAGTCCGCCACAAACTTGATGTACTCTGTCATGCTCTTCTCGCTGATA 157423 |||| |||||| || |||| |||||||| | ||| || | || | || Sbjct 113093 GACACCAGCAGCCGGTCCGCGACGAACTCGATGTACTGCGCCATCAGCTCCGCGTTCATG 113034 Query 157424 CCGATGAGCGCGACGGGAAGCGCCGACGAA-ATGAATTCGCACTCAACGCTAACAGCGTG 157482 || || ||| || || ||||| | || | ||||| |||| ||| | | | || || | Sbjct 113033 CCAATCAGCCGCACCGGCAGCGC-GTCGCAGATGAACTCGCGCTCGATGTTCACCGCATC 112975 Query 157483 CTTGAAAATTTCATGAACTCTCTCCCGCGGCAGCCTATTCTTGAGATGC---TTGTAGAT 157539 | || ||| || | || | ||| ||||||||| | | ||||| ||| ||||| | Sbjct 112974 CACGATAATCTCCAGCACGCGCTCGCGCGGCAGCTTGTGCTTGATGTGCGAGTTGTACAG 112915 Query 157540 GAGA-ACG-GAAG-CCGTGGCGTGAAGTCCTTCGTCTCTGGCGATGAGAGAGTTCGCGAA 157596 || | | |||| ||||| || || || ||||| | | |||||| ||| ||| Sbjct 112914 CAGGCATGCGAAGTCCGTG---TGTAGACCCTCGTCGCGCGAGATGAGCTCGTTGCTGAA 112858 Query 157597 CGACAAACCCTTGAACTTCTGCC---GCTTCTTCAGCCAGTAGATGGCGCAGAACGACCC 157653 || || |||| | | || | | |||||||||||||| | | |||||||||||||| Sbjct 112857 CGTCAG-CCCTGGCA--TCAGACCGCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCC 112801 Query 157654 ACTGAACTGCACGCCCTCCAGACAGGTGAAGCCGACTAGCCTCTCCGCGAGTGAAGCGGT 157713 || | |||||||| || ||||||| |||| |||| |||| | | Sbjct 112800 GGAAAAGAAAATGCCCTCCACCGCGGCAAAGCCGATCAGCCGCTCC-----TGAA-AGCT 112747 Query 157714 TTCGGGGTTC---ATCCACTTCTCTGCCCAGAGCGCCTTCTTTTCGATGATTGGCATCGT 157770 || | || |||||| | | ||||| ||||||||| | |||| || ||||| Sbjct 112746 CGCGCTGCTCCCGATCCACCGCACGGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGT 112687 Query 157771 CTGGAT 157776 ||| || Sbjct 112686 CTGTAT 112681 >seq33 Length=364854 Score = 102 bits (112), Expect = 2e-16 Identities = 397/611 (65%), Gaps = 26/611 (4%) Strand=Plus/Plus Query 157244 ACCCCGGGCTTGCTGTACTCGGCCACTCTATTCTCAAAAAAGTTGGTCTTTCCCTGGAGA 157303 || |||| ||| |||||| |||| | |||| || ||||| || || ||||| || Sbjct 190126 ACGCCGGCCTTCTGGTACTCCCCCACCTTCCTCTCGAAGAAGTTTGTTTTGCCCTGCAGC 190185 Query 157304 GAAATCATGTCCATCCACTCGAATGGGTTGGCGCAGTTGTACACCTTGTCGTACCCCAGC 157363 || ||||| ||||| | ||||| || | | ||| ||| ||| || | || ||| Sbjct 190186 GAGATCATCTCCATGAATTCGAACGGCTGCGTCGAGTGGTAGTGCTTCTCCTCGCCGAGC 190245 Query 157364 TGGTTCAGCCAGTAGTCCGCCACAAACTTGATGTACTCTGTCATGCTCTTCTCGCTGATA 157423 |||| |||||| || |||| |||||||| | ||| || | || | || Sbjct 190246 GACACCAGCAGCCGGTCCGCGACGAACTCGATGTACTGCGCCATCAGCTCCGCGTTCATG 190305 Query 157424 CCGATGAGCGCGACGGGAAGCGCCGACGAA-ATGAATTCGCACTCAACGCTAACAGCGTG 157482 || || ||| || || ||||| | || | ||||| |||| ||| | | | || || | Sbjct 190306 CCAATCAGCCGCACCGGCAGCGC-GTCGCAGATGAACTCGCGCTCGATGTTCACCGCATC 190364 Query 157483 CTTGAAAATTTCATGAACTCTCTCCCGCGGCAGCCTATTCTTGAGATGC---TTGTAGAT 157539 | || ||| || | || | ||| ||||||||| | | ||||| ||| ||||| | Sbjct 190365 CACGATAATCTCCAGCACGCGCTCGCGCGGCAGCTTGTGCTTGATGTGCGAGTTGTACAG 190424 Query 157540 GAGA-ACG-GAAG-CCGTGGCGTGAAGTCCTTCGTCTCTGGCGATGAGAGAGTTCGCGAA 157596 || | | |||| ||||| || || || ||||| | | |||||| ||| ||| Sbjct 190425 CAGGCATGCGAAGTCCGTG---TGTAGACCCTCGTCGCGCGAGATGAGCTCGTTGCTGAA 190481 Query 157597 CGACAAACCCTTGAACTTCTGCC---GCTTCTTCAGCCAGTAGATGGCGCAGAACGACCC 157653 || || |||| | | || | | |||||||||||||| | | |||||||||||||| Sbjct 190482 CGTCAG-CCCTGGCA--TCAGACCGCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCC 190538 Query 157654 ACTGAACTGCACGCCCTCCAGACAGGTGAAGCCGACTAGCCTCTCCGCGAGTGAAGCGGT 157713 || | |||||||| || ||||||| |||| |||| |||| | | Sbjct 190539 GGAAAAGAAAATGCCCTCCACCGCGGCAAAGCCGATCAGCCGCTCC-----TGAA-AGCT 190592 Query 157714 TTCGGGGTTC---ATCCACTTCTCTGCCCAGAGCGCCTTCTTTTCGATGATTGGCATCGT 157770 || | || |||||| | | ||||| ||||||||| | |||| || ||||| Sbjct 190593 CGCGCTGCTCCCGATCCACCGCACGGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGT 190652 Query 157771 CTGGATAGATCGCATGACGTGTCTCTGCTCTTCCGTGTCCCTGAAGTAAGTCTGAATAAG 157830 ||| || | ||| | | || ||| || ||||| ||| ||| || | | || Sbjct 190653 CTGTATCGCGTGCAGCAGCCGCAGCTTCTCCTCGCTGTCCGTGATGTACGTGTCCAGCAG 190712 Query 157831 CAGAGAGTACG 157841 || |||||||| Sbjct 190713 CACAGAGTACG 190723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073761777435648