Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq2 363 1e-95 seq33 210 2e-49 seq72 192 5e-44 seq14 93.3 4e-14 seq12 93.3 4e-14 seq4 91.5 1e-13 >seq2 Length=1084633 Score = 363 bits (402), Expect = 1e-95 Identities = 560/792 (71%), Gaps = 8/792 (1%) Strand=Plus/Plus Query 23021 GCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCG 23080 ||||| ||||| || ||||| || ||| ||| | ||||||||||| ||||| || Sbjct 752394 GCGATGGAGGCGAGGTTGCACACCGCCGTCTCCTGCGGCGACGTGTACTCGACAATCTCC 752453 Query 23081 GTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCAC 23140 || ||||| || ||||| |||||||| | ||| ||||||| || | ||||| Sbjct 752454 GTGCATAGGTTCGAGCACTTGATCGTGCCAAGATTCTTCTGGTTCGACTTGCTGTTGCAT 752513 Query 23141 GAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGC 23200 | ||||||||||| ||| ||||| ||||||||||| ||||||||| | ||| || | Sbjct 752514 GCGTCCTTGTAGAGGATGAACGGCCCGCCCGTCTCGATCTGCGACTCCAGGATGGCAAAC 752573 Query 23201 CACATAGTCTGAGCGTGAACACGTC-GCACGTACCTGCCTTCTTCCTCGTACTTTTGGTA 23259 |||| ||| || || | |||| ||| | ||| || |||||| | ||| Sbjct 752574 CACACCTCCTGGGCCTGGA-TCGTCTTGACGCCGCGGCCCTCGGACTCGTAGCGCTCGTA 752632 Query 23260 CAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGG-CCGGGCGATTGCATCGGACACA 23318 | | ||||| || |||| || || ||| ||| |||||| || | ||| || Sbjct 752633 GAGCCGCTCAAACTCCTCACCATAGCAATCGCTGAGGCCCGGGCACGTG-TTGGGATCCA 752691 Query 23319 TGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAG 23378 | || ||||| | || ||| || || |||||||| ||||| || ||||| || | Sbjct 752692 TCAGCGTCCACTTCCCCTCGCTTTTCACACGCCTCATAAACAGATCTGGGATCCACAGCG 752751 Query 23379 CGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAA 23438 | ||||| || |||||||||||| || ||||| || ||||| ||||| || || Sbjct 752752 CATAGAAGAGGTCGCGGGCGCGCTGGTCATCTTTTCCCGTGTTGCGTTTCAGCAGCAGAA 752811 Query 23439 AGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTAT 23498 || | || ||||| || ||||| |||||||| || |||||||| |||||| | |||| Sbjct 752812 AGCCAAAGACGTCGGCGTGCCAGGGCTCGAGATAGACGGCAAAGGCGCCCTTGCGCTTAC 752871 Query 23499 TGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGAC 23558 ||| ||||| || ||||| ||||| ||||||||| | || | |||||| |||||||| | Sbjct 752872 CGCCACCCTGGTCCACGTAGCGGGCGGTGTTGTTGAAGACGCGTAGCATTGGCACGAGCC 752931 Query 23559 CGTTGGACGCGCCG--CCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAAC 23616 |||| |||| |||| | || || || | || || || | |||||| || Sbjct 752932 CGTTCGACGTGCCGTTCGTA--CCAGCTATGTAGCTGCCCGCCGCGCGGATGTTGTGCAC 752989 Query 23617 GTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTA 23676 ||| | || ||||| ||| ||| ||| |||| |||||| | ||||| |||||||| Sbjct 752990 GTGCAGGCCAATGCCGCCGGCCGCTTTGCTGATCACCGCGCACTCCTTCAGGGTGTCGTA 753049 Query 23677 GATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTT 23736 |||||| ||||||||||| || || | ||| |||| ||| ||||| |||||||| || Sbjct 753050 GATGCCGTCGATGCTGTCTTCCTTCGACGCCACCAGGAAGCACGAGCTCATTTGCGGCTT 753109 Query 23737 GGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAG 23796 || || |||| || || |||||| ||||||| || ||| | || |||||||| || Sbjct 753110 CGGGGTGCCGGCGTTAAAGAGGGTCGGGGTGGCGTGGGTGAAGAAGCCCTTCGACATGAG 753169 Query 23797 ATTGTACGTGTC 23808 | |||||| || Sbjct 753170 GTCGTACGTCTC 753181 Score = 98.7 bits (108), Expect = 9e-16 Identities = 284/432 (66%), Gaps = 9/432 (2%) Strand=Plus/Plus Query 22453 GTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGG 22512 |||||| || | ||||||||| || || ||||| ||| ||||| || ||||| || Sbjct 751820 GTTCACAACAGGGAACTCGCCGCTCAGCACACGGCGGACGTAGATGTTCGAGGTGAAGGG 751879 Query 22513 TTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAA 22572 ||||| | || ||||| || || ||||| | ||| || ||||| ||||| || || | Sbjct 751880 CTCGAAGCACTCGTTGTTGCCGAGAATCTGCGAGGTGGACGCGGTTGGCATGGGGGCAAC 751939 Query 22573 CAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCA 22632 ||| || ||||| | || ||| || | || |||||| | | ||||||||| Sbjct 751940 CAGCAGGGAGTTGCGCATGCCCACCTGCATCACCTTCTCCTTGAGGCTGGCCCAGTCCCA 751999 Query 22633 CAGATCGGAC---GGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGC 22689 || || ||| | |||| ||||| ||| | |||| | ||| ||| || Sbjct 752000 GCGACCGCTGTTGGGCCGCGCATTCCTCCACAGGTCGAACTGCAGAATGCCCTCACTGGC 752059 Query 22690 CGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGC-TCGCCT 22748 ||||||||| | | || |||||||| || | | || || || || | || || Sbjct 752060 CGGGCTGCCCGTGAAGGTCTCGTACGGGCCCTCCTCCTTCGCCAGCTC-CATCGACGACT 752118 Query 22749 CCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGC 22808 | | ||| | | || || || |||||||| | | ||||| | || ||| | ||| Sbjct 752119 CGACCGCAGCAAAGTAGATCGTTTCGAAGATCTCCGCGTTCA--CCCGCTGCGCCTCCGC 752176 Query 22809 --TTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACC 22866 | |||||| ||||| | | ||| |||||||| | ||||| ||||| | || Sbjct 752177 CGAGACAAACGGCAGCCGCATGAGGATGAAGGCGTCCGCGAGCCCCTGCACGCCGAGGCC 752236 Query 22867 GATCGGTCGGTT 22878 ||| || ||||| Sbjct 752237 GATGGGGCGGTT 752248 >seq33 Length=364854 Score = 210 bits (232), Expect = 2e-49 Identities = 512/762 (67%), Gaps = 18/762 (2%) Strand=Plus/Minus Query 57678 TTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTG 57737 || || || || ||| | || || ||||||| ||| || || || | ||||||| | Sbjct 190871 TTCATCAAGCATGTGCTTGCCTTCTTCGCCGGCAGCGACGGCATAGTCATCGAGAATCTT 190812 Query 57738 GTCGAAAGATTTTCACAAG--AAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTC 57795 | || | | |||| || | ||| | ||| | |||||| | || ||||| || | Sbjct 190811 G-CGCA-GCGCTTCATGAGCGACGTGAAGGTGCCAGAGGCGCGCGCGTTCTACGGGTTCC 190754 Query 57796 AAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGA 57855 | || || || ||| | || || || | ||| || | || | || |||||| | | Sbjct 190753 AGCTGATGATGGAGAACATCCACTCGGAGACGTACTCTGTGCTGCTGGACACGTACATCA 190694 Query 57856 AGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCG-ATCGCC 57914 ||||| ||| ||||| | | ||| | ||||||| | || || |||| | ||| Sbjct 190693 CGGACAGCGAGGAGAAGCTGCGGCTGCTGCACGCGATACAGACGAT-CCCGTGCATCCAG 190635 Query 57915 AAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGG 57974 |||||||| |||||| | | ||||| ||| | || | ||| ||| || Sbjct 190634 AAGAAGGCGGAGTGGGCCGTGCGGTGGATCGGGAGCAGCGCGAGCT--TTCAG-GAGCGG 190578 Query 57975 CTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTC-GGGCAGCTTTGCGGCAATATT 58033 || |||| || ||||| || || || || |||||||| ||| | | |||| | | || Sbjct 190577 CTGATCGGCTTTGCCGCGGTGGAGGGCATTTTCTTTTCCGGGTCGTTCTGCG-CGCTGTT 190519 Query 58034 TTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCG 58093 ||| ||||||| ||||| |||||||| || |||||||| ||||||||| | || ||||| Sbjct 190518 CTGGCTGAAGAAGCGCGGTCTGATGCCAGGGCTGACGTTCAGCAACGAGCTCATCTCGCG 190459 Query 58094 CGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGT---ACTCTCACATTGTCAATAA 58150 |||||||||||| || || || || || ||||| ||| |||| ||||| | || Sbjct 190458 CGACGAGGGTCTACACACGGACTTCGCATGCCTGCTGTACAACTCGCACATCAAGCACAA 190399 Query 58151 ACCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTT 58210 | | |||| || ||| | |||| |||||| || ||||| ||||| ||||| Sbjct 190398 GCTGCCGCGCGAGCGCGTGCTGGAGATTATCGTGGATGCGGTGAACATCGAGCGCGAGTT 190339 Query 58211 TGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTA 58270 || ||| || || |||||| || | || |||||| || ||||| | |||| Sbjct 190338 CATCTGCGACGCGCTGCCGGTGCGGCTGATTGGCATGAACGCGGAGCTGATGGCGCAGTA 190279 Query 58271 CATTGAGTTTGTTGCCGACAGACTTTTG--CTCGAACTGATTGGAGAGCGTCATTACAAC 58328 ||| ||||| || || ||| | || || ||| | | ||||| || ||| || Sbjct 190278 CATCGAGTTCGTCGCGGACCGGCTGCTGGTGTCGCTCGGCGAGGAGA--AGCACTACCAC 190221 Query 58329 ACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTC 58388 ||| | ||||| || || ||| | |||||||||| ||||||| |||||||| ||| Sbjct 190220 TCGACGCAGCCGTTCGAATTCATGGAGATGATCTCGCTGCAGGGCAAAACAAACTTCTTC 190161 Query 58389 GaaaaaaaaGTTAGCGAATATCAAAAATACGGCGTGATGAGC 58430 || | || || | || || || || ||||||||||||| Sbjct 190160 GAGAGGAAGGTGGGGGAGTACCAGAAGGCCGGCGTGATGAGC 190119 >seq72 Length=122406 Score = 192 bits (212), Expect = 5e-44 Identities = 508/762 (67%), Gaps = 18/762 (2%) Strand=Plus/Plus Query 57678 TTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTG 57737 || || || || ||| | || || ||||||| ||| || || || | ||||||| | Sbjct 112468 TTCATCAAGCATGTGCTTGCCTTCTTCGCCGGCAGCGACGGCATAGTCATCGAGAATCTT 112527 Query 57738 GTCGAAAGATTTTCACAAG--AAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTC 57795 | || | | |||| || | ||| | ||| | |||||| | || ||||| || | Sbjct 112528 G-CGCA-GCGCTTCATGAGCGACGTGAAGGTGCCAGAGGCGCGCGCGTTCTACGGGTTCC 112585 Query 57796 AAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGA 57855 | || || || ||| | || || || | ||| || | || | || |||||| | | Sbjct 112586 AGCTGATGATGGAGAACATCCACTCGGAGACGTACTCTGTGCTGCTGGACACGTACATCA 112645 Query 57856 AGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCG-ATCGCC 57914 |||| ||| ||||| | | ||| | ||||||| | || || |||| | ||| Sbjct 112646 CAGACAGCGAGGAGAAGCTGCGGCTGCTGCACGCGATACAGACGAT-CCCGTGCATCCAG 112704 Query 57915 AAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGG 57974 |||||||| |||||| | | ||||| ||| | || | ||| ||| || Sbjct 112705 AAGAAGGCGGAGTGGGCCGTGCGGTGGATCGGGAGCAGCGCGAGCT--TTCAG-GAGCGG 112761 Query 57975 CTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTC-GGGCAGCTTTGCGGCAATATT 58033 || |||| || ||||| || || || || |||||||| ||| | | |||| | | || Sbjct 112762 CTGATCGGCTTTGCCGCGGTGGAGGGCATTTTCTTTTCCGGGTCGTTCTGCG-CGCTGTT 112820 Query 58034 TTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCG 58093 ||| ||||||| ||||| |||||||| || |||||||| ||||||||| | || ||||| Sbjct 112821 CTGGCTGAAGAAGCGCGGTCTGATGCCAGGGCTGACGTTCAGCAACGAGCTCATCTCGCG 112880 Query 58094 CGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGT---ACTCTCACATTGTCAATAA 58150 |||||||||||| || || || || || ||||| ||| |||| ||||| | || Sbjct 112881 CGACGAGGGTCTACACACGGACTTCGCATGCCTGCTGTACAACTCGCACATCAAGCACAA 112940 Query 58151 ACCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTT 58210 | | |||| || ||| | |||| |||||| || ||||| ||||| ||||| Sbjct 112941 GCTGCCGCGCGAGCGCGTGCTGGAGATTATCGTGGATGCGGTGAACATCGAGCGCGAGTT 113000 Query 58211 TGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTA 58270 || ||| || || |||||| || | || |||||| || ||||| | |||| Sbjct 113001 CATCTGCGACGCGCTGCCGGTGCGGCTGATTGGCATGAACGCGGAGCTGATGGCGCAGTA 113060 Query 58271 CATTGAGTTTGTTGCCGACAGACTTTTG--CTCGAACTGATTGGAGAGCGTCATTACAAC 58328 ||| ||||| || || ||| | || || ||| | | ||||| || ||| || Sbjct 113061 CATCGAGTTCGTCGCGGACCGGCTGCTGGTGTCGCTCGGCGAGGAGA--AGCACTACCAC 113118 Query 58329 ACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTC 58388 ||| | || || || || ||| | ||||||| || ||||||| || ||||| ||| Sbjct 113119 TCGACGCAGCCATTCGACTTCATGGAGATGATCTCTCTGCAGGGCAAAACGAACTTCTTC 113178 Query 58389 GaaaaaaaaGTTAGCGAATATCAAAAATACGGCGTGATGAGC 58430 || || | || | || || || || ||||||||||||| Sbjct 113179 GAGAAGAGGGTGGGGGAGTACCAGAAGGCCGGCGTGATGAGC 113220 >seq14 Length=517377 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| ||||| ||||| |||||| | | || || || ||| Sbjct 230696 CATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCGCTGGAGGTGGAGCCGAG 230755 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||| | || || | || ||||||||| ||| | ||||| ||||| Sbjct 230756 CGACACGATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCA 230815 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 |||||| || || ||||| ||||| ||| |||| || Sbjct 230816 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGA 230851 >seq12 Length=572832 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| ||||| ||||| |||||| | | || || || ||| Sbjct 485139 CATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCGCTGGAGGTGGAGCCGAG 485198 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||| | || || | || ||||||||| ||| | ||||| ||||| Sbjct 485199 CGACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCA 485258 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 |||||| || || ||||| ||||| ||| |||| || Sbjct 485259 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGA 485294 >seq4 Length=1102922 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| ||||| ||||| |||||| | | || || || ||| | Sbjct 384507 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCGCTGGAGGTGGAGCCGAGC 384448 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || ||||||||| ||| | ||||| |||||| Sbjct 384447 GACACGATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAG 384388 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||| || || ||||| ||||| ||| |||| || Sbjct 384387 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGA 384353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445764527781120