Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq72 95.1 2e-14 seq33 91.5 2e-13 >seq72 Length=122406 Score = 95.1 bits (104), Expect = 2e-14 Identities = 377/586 (64%), Gaps = 12/586 (2%) Strand=Plus/Minus Query 49952 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 50011 ||| || |||||||| || ||| ||||||||||| | || || |||||| | Sbjct 112918 ACAGCAGGCATGCGAAGTCCGTGTGTAGACCCTCGTCGCGCGAGATGAGCTCGTTGCTGA 112859 Query 50012 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGACCCA 50070 |||| || || ||||| || || ||||| || ||||| || | | |||| || ||||| Sbjct 112858 ACGTCAGCCCTGGCATCAGACCGCGCTTCTTCAGCCAGAACA-GCGCGCAGAACGACCCG 112800 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTG 50130 |||||||| || || || || ||||||||| | | || | ||| | | || |||||| Sbjct 112799 GAAAAGAAAATGCCCTCCACCGCGGCAAAGCCGATCAGCCGCTCCTGAAAGCTCGCGCTG 112740 Query 50131 -TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 50189 || | |||||| ||||| || |||||||| | | || || ||||| | ||| Sbjct 112739 CTCCCG-ATCCACCGCACGGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGTAT 112681 Query 50190 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACT 50249 || | | || || || | || ||| | | || || || | || | | Sbjct 112680 CGCGTGCAGCAGCCGCAGCTTCTCCTCGCTGTCTGTGATGTACGTGTCCAGCAGCACAGA 112621 Query 50250 ATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTC 50309 ||| | ||||| || ||||| || || || ||| || |||||||| | ||||| Sbjct 112620 GTACGTCTCCGAGTGGATGTTCTCCATCATCAGCTGGAACCCGTAGAACGCGCGCGCCTC 112561 Query 50310 GGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACT 50369 | | || ||| || | || || | || | ||| || | ||||| ||||| || Sbjct 112560 TGGCACCTTCACGTCGCTCATGAAGCGCTGCGCAAGATTCTCGATGACTATGCCGTCGCT 112501 Query 50370 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATT 50429 | | || || || || | ||||| || || || || || | | || | Sbjct 112500 GCCGGCGAAGAAGGCAAGCACATGCTTGATGAAGTGCCGCTCCCCGTCGTTCAGCGTTGC 112441 Query 50430 CCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGC--CTCT 50487 ||| || || || || || || || | || ||||| ||||| ||||| |||| Sbjct 112440 CCAGTCCTTCATGTCGTTGCCTAGGTCGATCTCCTCCACCGTCCA----GATGCAGCTCT 112385 Query 50488 GC--CTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAA 50531 | || || ||| | |||||||||||| || ||||||||||| Sbjct 112384 CCTGCTCCTTGTACTTGCGCCAGATGTCATGGTACTGGATTGGGAA 112339 >seq33 Length=364854 Score = 91.5 bits (100), Expect = 2e-13 Identities = 169/243 (70%), Gaps = 4/243 (2%) Strand=Plus/Plus Query 49952 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 50011 ||| || |||||||| || ||| ||||||||||| | || || |||||| | Sbjct 190421 ACAGCAGGCATGCGAAGTCCGTGTGTAGACCCTCGTCGCGCGAGATGAGCTCGTTGCTGA 190480 Query 50012 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGACCCA 50070 |||| || || ||||| || || ||||| || ||||| || | | |||| || ||||| Sbjct 190481 ACGTCAGCCCTGGCATCAGACCGCGCTTCTTCAGCCAGAACA-GCGCGCAGAACGACCCG 190539 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTG 50130 |||||||| || || || || ||||||||| | | || | ||| | | || |||||| Sbjct 190540 GAAAAGAAAATGCCCTCCACCGCGGCAAAGCCGATCAGCCGCTCCTGAAAGCTCGCGCTG 190599 Query 50131 -TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 50189 || | |||||| ||||| || |||||||| | | || || ||||| | ||| Sbjct 190600 CTCCCG-ATCCACCGCACGGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGTAT 190658 Query 50190 GGC 50192 || Sbjct 190659 CGC 190661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718265783271040