Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2 215 1e-50 >seq2 Length=1084633 Score = 215 bits (238), Expect = 1e-50 Identities = 589/887 (66%), Gaps = 34/887 (4%) Strand=Plus/Minus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501 ||||| || || || ||||| ||||| |||||||| ||| | || || || || | ||| Sbjct 753256 ATTGTGGAGCGTCCACAGCAGATGTTCATGCGTGTCGCTCTCGGCATTCACGGCGCAGAT 753197 Query 363502 GTTGATGCCGCGATTGAAACATATAAGCT----TCTAAGTGCTCGTGTATTCACGCACGC 363557 | | || | ||| || || | || || ||| ||| | ||||| ||||| Sbjct 753196 CTCAAGAACGTGCGTGAGACGTACGACCTCATGTCGAAGGGCT----TCTTCACCCACGC 753141 Query 363558 CACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCT 363617 ||| || || | | || || || || | || || || ||| || ||||| || | Sbjct 753140 CACCCCGACCCTCTTTAACGCCGGCACCCCGAAGCCGCAAATGAGCTCGTGCTTCCTGGT 753081 Query 363618 AAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTAT 363677 |||||| || |||||| || |||| ||||| || ||| | || || | || Sbjct 753080 GGCGTCGAAGGAAGACAGCATCGACGGCATCTACGACACCCTGAAGGAGTGCGCGGTGAT 753021 Query 363678 TTCCAAGAATGCAGGCGGAATTGG--TGTATCGATCCACAATGTTCGTGCACAGAACAGT 363735 ||| || ||||| ||||| || | || | ||||| | || || | ||| Sbjct 753020 CAGCAAAGCGGCCGGCGGCATTGGCCTGCA-CG-TGCACAACATCCGCGCGGCGGGCAGC 752963 Query 363736 TACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGAC 363795 ||||| || || || ||||| ||||| || || ||||| || || || || Sbjct 752962 TACATAGCTGGTACGAACGGCACGTCGAACGGGCTCGTGCCAATGCTACGCGTCTTCAAC 752903 Query 363796 AATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTAT 363855 || || || | ||||| ||||||||||| || |||||||| || || ||||| | ||| Sbjct 752902 AACACCGCCCGCTACGTGGACCAGGGTGGCGGTAAGCGCAAGGGCGCCTTTGCCGTCTAT 752843 Query 363856 CTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA---AACACGGGA 363912 |||||||| || ||||| | |||| ||||| ||| | |||| ||||||||| Sbjct 752842 CTCGAGCCCTGGCACGCCGACGTCTTTGGCTTTCT---GCTGCTGAAACGCAACACGGGA 752786 Query 363913 AAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATG 363972 ||||| || ||| || || || || |||||||| || ||| | | || | |||||| Sbjct 752785 AAAGATGACCAGCGCGCCCGCGACCTCTTCTATGCGCTGTGGATCCCAGATCTGTTTATG 752726 Query 363973 AAGCGCGTG--GAGGCAGGTAAGAATTGGTCACTCTT--TTGCCCACACGAATGTCCAGG 364028 | ||| ||| || ||| ||| ||| | || | | || ||||| || || || Sbjct 752725 AGGCGTGTGAAAAGCGAGG--GGAAGTGGACGCTGATGGATCCCAACACG--TGCCCGGG 752670 Query 364029 TCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGG 364088 || |||| | ||||| || | || || ||||| || || || ||||| Sbjct 752669 CCTCAGCGATTGCTATGGTGAGGAGTTTGAGCGGCTCTACGAGCGCTACGAGTCCGAGGG 752610 Query 364089 AAAGGCTCGT-AAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGA 364147 | ||| ||||| || | || ||| || | |||||||||||| |||| ||||||| Sbjct 752609 -CCGCGGCGTCAAGACGATCCAGGCCCAGGAGGTGTGGTTTGCCATCCTGGAGTCGCAGA 752551 Query 364148 TTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGC 364207 | ||||| || || | || | ||||| || | |||||| ||||||| |||||| Sbjct 752550 TCGAGACGGGCGGGCCGTTCATCCTCTACAAGGACGCATGCAACAGCAAGTCGAACCAGA 752491 Query 364208 AGCACCTTGGTACAATTCAGCAGAGC---AACCTATGTACCGAGATTATTGAATACACCG 364264 || | ||||| || | ||| || || |||||||| || |||||| | || ||||| Sbjct 752490 AGAATCTTGGCACGA-TCA--AGTGCTCGAACCTATGCACGGAGATTGTCGAGTACACGT 752434 Query 364265 CTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCG 364311 | || | ||||| || || || ||||| || || |||||||| ||| Sbjct 752433 CGCCGCAGGAGACGGCGGTGTGCAACCTCGCCTCCATCGCGCTGCCG 752387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303347989062752