Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq2 302 4e-77 seq72 178 1e-39 seq33 163 3e-35 seq14 107 2e-18 seq12 107 2e-18 seq4 107 2e-18 >seq2 Length=1084633 Score = 302 bits (334), Expect = 4e-77 Identities = 956/1454 (66%), Gaps = 41/1454 (3%) Strand=Plus/Plus Query 145051 GTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGT 145110 ||||| || || || | ||||||||| || |||||| || | || | ||| || || Sbjct 751814 GTACTTGTTCACAACAGGGAACTCGCCGCTCAGCACACGGCGGACGTAGATGTTCGAGGT 751873 Query 145111 GAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTA 145170 |||||| || || ||||||| ||||| || || || | ||| | ||||| |||||| Sbjct 751874 GAAGGGCTCGAAGCACTCGTTGTTGCCGAGAATCTGCGAGGTGGACGCGGTTGGCATGGG 751933 Query 145171 CGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCA 145230 || |||| | || ||||||| ||| || | | | | ||||| || | |||| Sbjct 751934 GGCAACCAGCAGGGAGTTGCGCATGCCCACCTGCATCACCTTCTCCTTGAGGCTGGCCCA 751993 Query 145231 ATCCCATAG--CGAAGTCGG-CCTCACGTCCC---ACATGTCGTACTGCAAAATGCCCTC 145284 ||||| | || || || || | | | || ||| |||| |||||| ||||||||| Sbjct 751994 GTCCCAGCGACCGCTGTTGGGCCGCGCATTCCTCCACAGGTCGAACTGCAGAATGCCCTC 752053 Query 145285 GCTGGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACT 145344 ||||| |||||||| |||| ||| |||| || || ||||| || | Sbjct 752054 ACTGGCCGGGCTGCCCGTGAAGGTCTCGTACGGGCCCTCCTCCTTCGCCAGCTC-CATCG 752112 Query 145345 -CGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTT 145403 || ||| | || | || || || || ||| || | | ||| | | || ||| | Sbjct 752113 ACGACTCGACCGCAGCAAAGTAGATCGTTTCGAAGATCTCCGCGTTCACCCGCTGCGCCT 752172 Query 145404 CATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCA 145463 | | | |||||| |||| || | || || || ||||||||||| | || | Sbjct 752173 CCGCCGAGACAAACGGCAGCCGCATGAGGATGAAGGCGTCCGCGAGCCCCTGCACGCCGA 752232 Query 145464 CGCCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTAC 145523 ||||||||| || | |||||| || | ||||| ||||| || || || | Sbjct 752233 GGCCGATGGGGCGGTTGCGCATGTTACTGCGGCGCGCCGTCTCGACCGGGTAGTAGTTGC 752292 Query 145524 GGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAA---TGTGCCGCAACTTTT 145580 |||| |||| || | ||| || | |||||| | ||| | | || | Sbjct 752293 GGTCAATAACGCGGTTGAGGTTGCGTGTGATCTGCTTTGTCACGGTGTAGAGAAGCTGGT 752352 Query 145581 CAAAGTCAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAAT 145640 ||| || || || |||||| | || ||| | ||||| || || | | Sbjct 752353 GGT--TCAGCTCGCGCTTC-TCAACGTCGACGAAGCGCGGCAGCGCGATGGAGGCGAGGT 752409 Query 145641 TACAAACTGCCGTCTCCT-CGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTA 145699 | || || |||||||||| ||||| || |||| | || ||||| | ||| | || Sbjct 752410 TGCACACCGCCGTCTCCTGCGGCGACG-TGTACTCGACAATCTCCGTGCATAGGTTCGAG 752468 Query 145700 CATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGC 145759 || ||||| || || ||||| | ||| || || |||||||| |||||||||||||| Sbjct 752469 CACTTGATCGTGCCAAGATTCTTCTGGTTCGACTTGCTGTTGCATGCGTCCTTGTAGAGG 752528 Query 145760 ATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGATA--AAACGGTGCAAGTCCTGCG 145817 ||| |||| ||||| ||||| | ||||| ||||| ||| |||| || ||||| | Sbjct 752529 ATGAACGGCCCGCCCGTCTCGATCTGCGACTCCAGGATGGCAAACCA--CACCTCCTGGG 752586 Query 145818 CACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACG 145877 | | | | || | ||||||||| ||||| | ||||||| ||||||| Sbjct 752587 CCTGGATCGTCTTGACGCCGCGGCCCTCGGACTCGTAGCGCTCGTAGAGCCGCTCAAACT 752646 Query 145878 CGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGC 145937 | ||| ||||||||| ||||| || ||| |||||||| |||||||| ||| | Sbjct 752647 CCTCACCATAGCAATCGCTGAGGCCCGGGCACGTGTTGGGATCCATCAGCGTCCACTTCC 752706 Query 145938 CGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGC 145997 | | | || || ||| |||||||| |||||| | ||||||||| || | | ||||| Sbjct 752707 CCTCGCTTTTCACACGCCTCATAAACAGATCTGGGATCCACAGCGCATAGAAGAGGTCGC 752766 Query 145998 G--CGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCACACTATAGATGTC 146055 | ||| || || || ||| |||| || |||| || | | | ||| ||| Sbjct 752767 GGGCGCGCTGG--TCATCTTTTCCCGTGTTGCGTTTCAGCAGCAGAAAGCCAAAGACGTC 752824 Query 146056 CGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTT---GCCACCCTGGTC 146112 |||||||| || || | ||||||||| | ||| || || || || |||||||||||| Sbjct 752825 GGCGTGCCAGGGCTCGAGATAGACGGCAAAGGCGCCCTTGCGCTTACCGCCACCCTGGTC 752884 Query 146113 CACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCC 146172 ||||| || | ||||||| |||||||| | ||| ||| ||| ||| | | ||| Sbjct 752885 CACGTAGCGGGCGGTGTTGTTGAAGACGCGTAGCATTGGCACGAGCCCGTTCGACGTGCC 752944 Query 146173 GTTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACC 146232 ||||||| ||| | |||| | ||| | | || || | || ||| | || Sbjct 752945 GTTCGTACCAGCTATGTAGCTGCCCGCCGCGCGGATGTTGTGCACGTGCAGGCCAATGCC 753004 Query 146233 GCC-GCCGTACTTGGAT-ATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATG 146290 ||| |||| ||| | | || | ||||| || || || |||||||||||||| ||| Sbjct 753005 GCCGGCCG--CTTTGCTGATCACCGCGCACTCCTTCAGGGTGTCGTAGATGCCGTCGATG 753062 Query 146291 CTATC--GCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCG 146348 || || ||||| | ||| | ||| |||||||||| ||| |||| | |||| || || | Sbjct 753063 CTGTCTTCCTTCG-ACGCC-ACCAGGAAGCACGAGCTCATTTGCGGCTTCGGGGTGCCGG 753120 Query 146349 CCGAGAACAACGTCGGGCTCGCGTGCGTAAACA--TTTTTCGGCTCATCATCCGATACGT 146406 | || | |||||| | ||||| || || | |||| ||| | ||||| Sbjct 753121 CGTTAAAGAGGGTCGGGGTGGCGTGGGTGAAGAAGCCCTTCG--ACATGAGGTCGTACGT 753178 Query 146407 TTCGATAGCG-TCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGT 146465 || || ||||| | || |||| |||||||| | |||||| ||||||| ||| | Sbjct 753179 CTCACGCACGTTCTTG-AGATCTGCGCCGTGAATGCCGAGAGCGACACGCATGAACATCT 753237 Query 146466 GTTGGGGCCGCTCC 146479 | || || |||||| Sbjct 753238 GCTGTGGACGCTCC 753251 >seq72 Length=122406 Score = 178 bits (196), Expect = 1e-39 Identities = 360/518 (69%), Gaps = 15/518 (3%) Strand=Plus/Plus Query 46084 ATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCG 46143 || |||||| | | ||||| | || ||||| || ||||||| |||||| ||| Sbjct 112690 ATCCCGTGCATCCAGAAGAAGGCGGAGTGGGCCGTGCGGTGGATCGGGAGCAGC---GCG 112746 Query 46144 A-CTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCA- 46201 | ||||| ||||| || | | |||||| ||||||||| | || ||||| || Sbjct 112747 AGCTTTCAG-GAGCGGCTGATCGGCTTTGCCGCGGTGGAGGGCATTTTCTTTTCCGGGTC 112805 Query 46202 GTTTTGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGC 46260 ||| ||| || | || | | || || | || | | ||||| || |||||||| ||| Sbjct 112806 GTTCTGC-GCGCTGTTCTGGCTGAAGAAGCGCGGTC-TGATGCCAGGGCTGACGTTCAGC 112863 Query 46261 AACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAAC 46320 |||||||| || |||||||||||||| || || |||||||| || || || || ||| Sbjct 112864 AACGAGCTCATCTCGCGCGACGAGGGTCTACACACGGACTTCGCATGCCTGCTGTACAAC 112923 Query 46321 ACTCGCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTG 46380 | | | | | ||||||| ||| ||| ||||||| || || ||| |||||| Sbjct 112924 TCGCACATCAAGCACAAGCTGCCGCGCGAGCGCGTGCTGGAGATTATCGTGGATGCGGTG 112983 Query 46381 GCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGC-CCTGCTGGGCATGAACGC 46439 ||| ||| ||||| | | ||| ||| ||| ||| ||| | ||||||||||| Sbjct 112984 AACATCGAGCGCGAGTTCATCTGCGACGCGCTG-CCGGTGCGGCTGATTGGCATGAACGC 113042 Query 46440 ACAGTCAATGTGCG-ACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACC 46498 || ||| ||| | ||||||||||| || |||||||| ||||| ||| ||| | Sbjct 113043 GGAGCTGATG-GCGCAGTACATCGAGTTCGTCGCGGACCGGCTGCTGGTGTCGCTCGGCG 113101 Query 46499 AGCCGAAGCATTTTCACGCG-CGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAG 46557 || |||||| | ||| || ||| | ||||| || || ||| | | ||||| ||| || Sbjct 113102 AGGAGAAGCACTACCACTCGACGC-AGCCATTCGACTTCATGGAGATGATCTCTCTGCAG 113160 Query 46558 GGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 |||||||| || || ||||| ||| | || || ||||| Sbjct 113161 GGCAAAACGAACTTCTTCGAGAAGAGGGTGGGGGAGTA 113198 >seq33 Length=364854 Score = 163 bits (180), Expect = 3e-35 Identities = 357/518 (69%), Gaps = 15/518 (3%) Strand=Plus/Minus Query 46084 ATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCG 46143 || |||||| | | ||||| | || ||||| || ||||||| |||||| ||| Sbjct 190649 ATCCCGTGCATCCAGAAGAAGGCGGAGTGGGCCGTGCGGTGGATCGGGAGCAGC---GCG 190593 Query 46144 A-CTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCA- 46201 | ||||| ||||| || | | |||||| ||||||||| | || ||||| || Sbjct 190592 AGCTTTCAG-GAGCGGCTGATCGGCTTTGCCGCGGTGGAGGGCATTTTCTTTTCCGGGTC 190534 Query 46202 GTTTTGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGC 46260 ||| ||| || | || | | || || | || | | ||||| || |||||||| ||| Sbjct 190533 GTTCTGC-GCGCTGTTCTGGCTGAAGAAGCGCGGTC-TGATGCCAGGGCTGACGTTCAGC 190476 Query 46261 AACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAAC 46320 |||||||| || |||||||||||||| || || |||||||| || || || || ||| Sbjct 190475 AACGAGCTCATCTCGCGCGACGAGGGTCTACACACGGACTTCGCATGCCTGCTGTACAAC 190416 Query 46321 ACTCGCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTG 46380 | | | | | ||||||| ||| ||| ||||||| || || ||| |||||| Sbjct 190415 TCGCACATCAAGCACAAGCTGCCGCGCGAGCGCGTGCTGGAGATTATCGTGGATGCGGTG 190356 Query 46381 GCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCC-CTGCTGGGCATGAACGC 46439 ||| ||| ||||| | | ||| ||||| | ||| ||| | ||||||||||| Sbjct 190355 AACATCGAGCGCGAGTTCATCTGCGACGCGCTGCCGG-TGCGGCTGATTGGCATGAACGC 190297 Query 46440 ACAGTCAATGTGCG-ACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACC 46498 || ||| ||| | ||||||||||| || |||||||| ||||| ||| ||| | Sbjct 190296 GGAGCTGATG-GCGCAGTACATCGAGTTCGTCGCGGACCGGCTGCTGGTGTCGCTCGGCG 190238 Query 46499 AGCCGAAGCATTTTCACGCG-CGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAG 46557 || |||||| | ||| || ||| | || || || || ||| | | ||||| ||| || Sbjct 190237 AGGAGAAGCACTACCACTCGACGC-AGCCGTTCGAATTCATGGAGATGATCTCGCTGCAG 190179 Query 46558 GGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 |||||||| || || ||||| | | || || ||||| Sbjct 190178 GGCAAAACAAACTTCTTCGAGAGGAAGGTGGGGGAGTA 190141 >seq14 Length=517377 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||||| |||||||| | || | || |||||||| || |||||||| || Sbjct 230924 GCCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGA 230865 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| ||||| ||||||||||| ||| |||| | |||||||||||||| || Sbjct 230864 GAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGG 230805 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| || ||| | | ||| | || ||| | | ||| | Sbjct 230804 GATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATCGTGTCGCTCGGCTCCAC 230745 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | | | || || ||||| || || || ||||| ||||||||| Sbjct 230744 CTCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATG 230696 >seq12 Length=572832 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||||| |||||||| | || | || |||||||| || |||||||| || Sbjct 485367 GCCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGA 485308 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| ||||| ||||||||||| ||| |||| | |||||||||||||| || Sbjct 485307 GAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGG 485248 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| || ||| | | ||| | || ||| | | ||| | Sbjct 485247 GATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGCTCGGCTCCAC 485188 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | | | || || ||||| || || || ||||| ||||||||| Sbjct 485187 CTCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATG 485139 >seq4 Length=1102922 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131006 AGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGC 131065 |||| ||||||| |||||||| | || | || |||||||| || |||||||| || Sbjct 384279 AGCCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCG 384338 Query 131066 TCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 | ||||| ||||| ||||||||||| ||| |||| | |||||||||||||| | Sbjct 384339 AGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCG 384398 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 |||| || || ||||| ||| || ||| | | ||| | || ||| | | ||| | Sbjct 384399 GGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATCGTGTCGCTCGGCTCCA 384458 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | | | || || ||||| || || || ||||| |||||||| Sbjct 384459 CCTCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 384507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472010817546240