Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq8 105 8e-18 seq2 93.3 5e-14 >seq8 Length=755259 Score = 105 bits (116), Expect = 8e-18 Identities = 169/243 (70%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 15352 GGAAGTCATGTATTCGGGCTTTACCGGCGAAAGGATCCAAAGCACCATATTTATGGGACC 15411 ||| ||| | |||||||| | || ||||| || || || | | || | || || Sbjct 1260 GGATGTCTTTTATTCGGGAATCACGGGCGAGTTAATGCAGGGCTACGTCTTCTTTGGGCC 1201 Query 15412 GACGTACTATCACCGACTCAAACACATGGTAAAGGACAAGATGCACGCGCGATCGCACGG 15471 | ||||| || || ||||| |||||||| | |||||||||||||| || ||| ||| Sbjct 1200 CATCTACTACCAGCGCCTCAAGCACATGGTTACAGACAAGATGCACGCCCGCTCGACCGG 1141 Query 15472 ACAGGTGACGACGCTCCATCGCCAGCCCAACTGCGGTCGATCGCAAGGCGGTGGCCTCCG 15531 | | ||| |||| ||||||||| | | ||||| || | | ||||| ||||| Sbjct 1140 GCCACGGTCGATGCTCACTCGCCAGCCAACCGAGGGTCGGTCTCGCAGTGGTGGTCTCCG 1081 Query 15532 CTTTGGAGAGATGGAAAAGGACTGCATTCTGGTGCACGGCGCCACCCAATTCCTCAACGA 15591 | |||| |||||||| |||||||| | | ||||||| || | |||||||||| Sbjct 1080 CGTTGGTGAGATGGAGCGCGACTGCATGGTTGGCTACGGCGCGTCCAACCTCCTCAACGA 1021 Query 15592 GCG 15594 ||| Sbjct 1020 GCG 1018 >seq2 Length=1084633 Score = 93.3 bits (102), Expect = 5e-14 Identities = 144/203 (71%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 126180 GGTGTAAATGTAGCGGGGAGCTGCCGAATCCTTGCCTCCCTCCAACCGCGTGCCAAACTG 126239 |||| | ||||||||| || || |||||||| || | || ||||| || ||||| Sbjct 179935 GGTGAAGATGTAGCGGCCCGCGGCGTGGTCCTTGCCACCGTGCAGACGCGTACCGAACTG 179994 Query 126240 ACCGTCCGGCTCCAACAACTGCACATTGTTGGCTCCCACAAAGTCCTGCGCAAACTTGAC 126299 ||| ||| || || | | || |||||| ||||||||||||||||| | ||| Sbjct 179995 ACCATCCTTGCGCAGCAGCGGGACGTTGTTGCTGCCCACAAAGTCCTGCGCCATTCCGAC 180054 Query 126300 AATGGTCTCGCAC-AGGTTCTGCTCGCCGTGCTTGTAGTCGGTCTGCTCGGCCACGTAGC 126358 || |||| |||| || ||||||||| || | ||| ||| ||||| | ||||||| Sbjct 180055 GATCGTCT-GCACGAGCGACTGCTCGCCATGGTGGTACGCGGAGTGCTCCGAGACGTAGC 180113 Query 126359 CGCTCAGCTGCGCAACCTTGATA 126381 | |||||| | ||||||||| Sbjct 180114 CAGCAAGCTGCACCACCTTGATA 180136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611389432153600