Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq72 86.0 8e-12 seq33 86.0 8e-12 >seq72 Length=122406 Score = 86.0 bits (94), Expect = 8e-12 Identities = 168/243 (69%), Gaps = 4/243 (2%) Strand=Plus/Minus Query 32653 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 32712 ||| || |||||||| || ||||||||||||||| | || | |||||| | Sbjct 112918 ACAGCAGGCATGCGAAGTCCGTGTGTAGACCCTCGTCGCGCGAGATGAGCTCGTTGCTGA 112859 Query 32713 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGATCCA 32771 |||| || || ||||| || || ||||| || ||||| || | | |||| || || || Sbjct 112858 ACGTCAGCCCTGGCATCAGACCGCGCTTCTTCAGCCAGAACAGCG-CGCAGAACGACCCG 112800 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTG 32831 ||||||||||| || || || || |||||| | || || | ||| | | | |||||| Sbjct 112799 GAAAAGAAAATGCCCTCCACCGCGGCAAAGCCGATCAGCCGCTCCTGAAAGCTCGCGCTG 112740 Query 32832 -TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTAT 32890 || | |||||| ||||| || |||||||| | | || || || |||| ||| Sbjct 112739 CTCCCG-ATCCACCGCACGGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGTAT 112681 Query 32891 AGC 32893 || Sbjct 112680 CGC 112678 >seq33 Length=364854 Score = 86.0 bits (94), Expect = 8e-12 Identities = 168/243 (69%), Gaps = 4/243 (2%) Strand=Plus/Plus Query 32653 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 32712 ||| || |||||||| || ||||||||||||||| | || | |||||| | Sbjct 190421 ACAGCAGGCATGCGAAGTCCGTGTGTAGACCCTCGTCGCGCGAGATGAGCTCGTTGCTGA 190480 Query 32713 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGATCCA 32771 |||| || || ||||| || || ||||| || ||||| || | | |||| || || || Sbjct 190481 ACGTCAGCCCTGGCATCAGACCGCGCTTCTTCAGCCAGAACA-GCGCGCAGAACGACCCG 190539 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTG 32831 ||||||||||| || || || || |||||| | || || | ||| | | | |||||| Sbjct 190540 GAAAAGAAAATGCCCTCCACCGCGGCAAAGCCGATCAGCCGCTCCTGAAAGCTCGCGCTG 190599 Query 32832 -TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTAT 32890 || | |||||| ||||| || |||||||| | | || || || |||| ||| Sbjct 190600 CTCCCG-ATCCACCGCACGGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGTAT 190658 Query 32891 AGC 32893 || Sbjct 190659 CGC 190661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633629338745600