Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq72 134 3e-26 seq33 131 3e-25 seq2 100 6e-16 >seq72 Length=122406 Score = 134 bits (148), Expect = 3e-26 Identities = 557/858 (65%), Gaps = 32/858 (4%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | ||||||| ||||||||| | ||||||||||||||| || | || Sbjct 113180 TCGAAGAAGTTCGTTTTGCCCTGCAGAGAGATCATCTCCATGAAGTCGAATGGCTGCGTC 113121 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | | ||| ||||| | ||| || | || | | ||||| || || ||||| | Sbjct 113120 GAGTGGTAGTGCTTCTCCTCGCCGAGCGACACCAGCAGCCGGTCCGCGACGAACTCGATG 113061 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| ||||||| || | |||||||||||||| || || | || || |||||| Sbjct 113060 TACTGCGCCATCAGCTCCGCGTTCATGCCAATCAGCCGCACCGGCAGCGCGTCGCAGATG 113001 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACAGC 251802 || || ||| || || || ||| | | ||| || ||| | | | | |||| Sbjct 113000 AACTCGCGCTCGATGTTCACCGCATCCACGATAATCTCCAGCACGCGCTCGCGCGGCAGC 112941 Query 251803 TTGTTCTCCAGCTTTGA---GTACAGGA-GCTCGCCAA-ACTGTTGGTGCAGACCCTCGT 251857 |||| || | | || |||||| | || || || | || ||| |||||||||| Sbjct 112940 TTGTGCTTGATGTGCGAGTTGTACAGCAGGCATGCGAAGTCCGT--GTGTAGACCCTCGT 112883 Query 251858 CGCGACTGATGAACTCGTTGGACAGACC--CAGGCCAGGCATCACCCCACGGTTCCTGAG 251915 |||| ||||| ||||||| | || | ||| || ||||||| || || ||| | || Sbjct 112882 CGCGCGAGATGAGCTCGTTG--CTGAACGTCAGCCCTGGCATCAGACCGCGCTTCTTCAG 112825 Query 251916 CCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATG-CAA 251974 |||||| | ||||| || || || || || | | ||||| || | | | | | | | Sbjct 112824 CCAGAACAGCGCGCAGAACGACCCGGAAAAGAAAATGCCCTCCAC-CGCGGCAAAGCCGA 112766 Query 251975 CAAGGCGCTCAGCAAACGACTTGTCCTGCGAC--AAGAACTTCTGTGCCCATGCTGCCTT 252032 || ||||| ||| || | |||| | | || | ||||| | ||||| Sbjct 112765 TCAGCCGCTCCTGAAA--GCTCGCGCTGCTCCCGATCCACCGCACGGCCCACTCCGCCTT 112708 Query 252033 CTT-TCCAACCGCGGG---GATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCAT 252088 ||| | | | |||| | ||| ||| |||| || || ||| |||| Sbjct 112707 CTTCTGGATGCACGGGATCGTCTGTATCGCGTGCAGCAGCCGCAG-CTTCTCCTCG---C 112652 Query 252089 CGTCCTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGTTGA 252148 ||| |||| || || ||||| | ||||||| ||||||| |||||| || | | Sbjct 112651 TGTCTGTGATGTACGTGTCCAGCAGCACAGAGTACGTCTCCGAGTGGATGTTCTCCATCA 112592 Query 252149 ACATCTGGTAAGCATAGAATAGACGCGCGGAAGGGTCGGTGACTTCCGTGGAAAAGTTGT 252208 || |||| | | ||||| ||||| || | | || || | ||| | Sbjct 112591 TCAGCTGGAACCCGTAGAACGCGCGCGCCTCTGGCACCTTCACGTCGCTCATGAAGCGCT 112532 Query 252209 TTGCAATGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCAAGAATGGTCTTGA 252268 |||| ||||| || || ||||| |||||||| || |||||| |||| | ||||| Sbjct 112531 GCGCAAGATTCTCGATGACTATGCCGTCGCTGCCGGCGAAGAAGGCAAGCACATGCTTGA 112472 Query 252269 TGAAGTGACGCTCATCGTCGTTGAGCTTGTCACGCCAGTCGGCAATGTC-CTGATTCAGA 252327 ||||||| ||||| ||||||| ||| | | |||||| ||||| || | | Sbjct 112471 TGAAGTGCCGCTCCCCGTCGTTCAGCGTTGC---CCAGTCCTTCATGTCGTTGCCTAGGT 112415 Query 252328 GGAACTTCTTCCACCGTCCAGAATGTGGACACCGCCTTCTTGTACATTGCG-AACACATC 252386 || | || ||||||||||||| | | || || ||||||| ||||| | | || Sbjct 112414 CGATC-TCCTCCACCGTCCAGATGCAGCTCTCCTGCTCCTTGTAC-TTGCGCCAGATGTC 112357 Query 252387 AGGGTACTTGATTGGGAA 252404 | |||||| ||||||||| Sbjct 112356 ATGGTACTGGATTGGGAA 112339 >seq33 Length=364854 Score = 131 bits (144), Expect = 3e-25 Identities = 554/857 (65%), Gaps = 30/857 (4%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | ||||||| ||| ||||| | ||||||||| ||||| || | || Sbjct 190159 TCGAAGAAGTTTGTTTTGCCCTGCAGCGAGATCATCTCCATGAATTCGAACGGCTGCGTC 190218 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | | ||| ||||| | ||| || | || | | ||||| || || ||||| | Sbjct 190219 GAGTGGTAGTGCTTCTCCTCGCCGAGCGACACCAGCAGCCGGTCCGCGACGAACTCGATG 190278 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| ||||||| || | |||||||||||||| || || | || || |||||| Sbjct 190279 TACTGCGCCATCAGCTCCGCGTTCATGCCAATCAGCCGCACCGGCAGCGCGTCGCAGATG 190338 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACAGC 251802 || || ||| || || || ||| | | ||| || ||| | | | | |||| Sbjct 190339 AACTCGCGCTCGATGTTCACCGCATCCACGATAATCTCCAGCACGCGCTCGCGCGGCAGC 190398 Query 251803 TTGTTCTCCAGCTTTGA---GTACAGGA-GCTCGCCAA-ACTGTTGGTGCAGACCCTCGT 251857 |||| || | | || |||||| | || || || | || ||| |||||||||| Sbjct 190399 TTGTGCTTGATGTGCGAGTTGTACAGCAGGCATGCGAAGTCCGT--GTGTAGACCCTCGT 190456 Query 251858 CGCGACTGATGAACTCGTTGGACAGACC--CAGGCCAGGCATCACCCCACGGTTCCTGAG 251915 |||| ||||| ||||||| | || | ||| || ||||||| || || ||| | || Sbjct 190457 CGCGCGAGATGAGCTCGTTG--CTGAACGTCAGCCCTGGCATCAGACCGCGCTTCTTCAG 190514 Query 251916 CCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATG-CAA 251974 |||||| | ||||| || || || || || | | ||||| || | | | | | | | Sbjct 190515 CCAGAACAGCGCGCAGAACGACCCGGAAAAGAAAATGCCCTCCAC-CGCGGCAAAGCCGA 190573 Query 251975 CAAGGCGCTCAGCAAACGACTTGTCCTGCGAC--AAGAACTTCTGTGCCCATGCTGCCTT 252032 || ||||| ||| || | |||| | | || | ||||| | ||||| Sbjct 190574 TCAGCCGCTCCTGAAA--GCTCGCGCTGCTCCCGATCCACCGCACGGCCCACTCCGCCTT 190631 Query 252033 CTT-TCCAACCGCGGG---GATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCAT 252088 ||| | | | |||| | ||| ||| |||| || || ||| |||| Sbjct 190632 CTTCTGGATGCACGGGATCGTCTGTATCGCGTGCAGCAGCCGCAG-CTTCTCCTCG---C 190687 Query 252089 CGTCCTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGTTGA 252148 |||| |||| || || ||||| | ||||||| ||||||| |||||| || | | Sbjct 190688 TGTCCGTGATGTACGTGTCCAGCAGCACAGAGTACGTCTCCGAGTGGATGTTCTCCATCA 190747 Query 252149 ACATCTGGTAAGCATAGAATAGACGCGCGGAAGGGTCGGTGACTTCCGTGGAAAAGTTGT 252208 || |||| | | ||||| ||||| || | | || || | ||| | Sbjct 190748 TCAGCTGGAACCCGTAGAACGCGCGCGCCTCTGGCACCTTCACGTCGCTCATGAAGCGCT 190807 Query 252209 TTGCAATGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCAAGAATGGTCTTGA 252268 |||| ||||| || || ||||| |||||||| || |||||| |||| | ||||| Sbjct 190808 GCGCAAGATTCTCGATGACTATGCCGTCGCTGCCGGCGAAGAAGGCAAGCACATGCTTGA 190867 Query 252269 TGAAGTGACGCTCATCGTCGTTGAGCTTGTCACGCCAGTCGGCAATGTCCTGATTCAGAG 252328 ||||||| ||||| ||||||| ||| | | |||||| ||||| | ||| Sbjct 190868 TGAAGTGCCGCTCCCCGTCGTTCAGCGTTGC---CCAGTCCTTCATGTCGTTGCCCAGGT 190924 Query 252329 GAACTTCTTCCACCGTCCAGAATGTGGACACCGCCTTCTTGTACATTGCG-AACACATCA 252387 | || ||||||||||||| | | || || ||||||| ||||| | | ||| Sbjct 190925 CGATCTCCTCCACCGTCCAGATGCAGCTCTCCTGCTCCTTGTAC-TTGCGCCAGATGTCA 190983 Query 252388 GGGTACTTGATTGGGAA 252404 |||||| ||||||||| Sbjct 190984 TGGTACTGGATTGGGAA 191000 >seq2 Length=1084633 Score = 100 bits (110), Expect = 6e-16 Identities = 215/318 (68%), Gaps = 20/318 (6%) Strand=Plus/Minus Query 218518 GACTTCATCGACAAGGAGCTCATTCTTTTC----TCGCGGTATGATGTGGAGCGTTCTAT 218573 ||||| | ||||||||||| ||||| ||| |||| | || ||||| || Sbjct 180270 GACTTTGTGGACAAGGAGCTGATTCTCTTCTCCATCGCCGACTG----CGAGCGCAGCAT 180215 Query 218574 TCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAA 218633 || |||||| | || ||| ||||||| ||||| |||||||| || || ||||| Sbjct 180214 CCCGAGCGTGATTGACGGCTTCAAGCCCGGCCAGCGCAAGATCCTGTTCTCCTGCTTCAA 180155 Query 218634 GCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTC 218693 ||| ||| |||| | || ||||| | ||| || |||| || || || || || Sbjct 180154 GCGCAACTTGGTGAACTCTATCAAGGTGGTGCAGCTTGCTGGCTACGTCTCGGAGCACTC 180095 Query 218694 TGGCTACCATCACGGTGAGCAGAGTC---TGCAGGGTGCCATTGTAGGCATGGCACAGGA 218750 | ||||| || || |||||| | ||||| | || || || ||||| ||||| Sbjct 180094 CGCGTACCACCATGGCGAGCAGTCGCTCGTGCAG---ACGATCGTCGGAATGGCGCAGGA 180038 Query 218751 CTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCA---ACGGTCAGTTTGGTTCTCG 218807 || ||||||||| |||||| | | |||||| | || | |||||||| ||| | || Sbjct 180037 CTTTGTGGGCAGCAACAACGT---CCCGCTGCTGCGCAAGGATGGTCAGTTCGGTACGCG 179981 Query 218808 TCTATTGGGTGGAAAGGA 218825 ||| ||||| ||||| Sbjct 179980 TCTGCACGGTGGCAAGGA 179963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027832375162576