Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq72 178 2e-39 seq33 174 3e-38 seq4 163 5e-35 seq14 161 2e-34 seq12 156 8e-33 seq2 125 1e-23 seq36 87.8 3e-12 seq27 87.8 3e-12 seq7 87.8 3e-12 >seq72 Length=122406 Score = 178 bits (196), Expect = 2e-39 Identities = 308/443 (70%), Gaps = 11/443 (2%) Strand=Plus/Minus Query 9934 TCATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCT 9993 |||| ||||| ||||||||||||||| |||| |||||||||||| | ||||||| Sbjct 113218 TCATCACGCCGGCCTTCTGGTACTCCCCCACCCTCTTCTCGAAGAAGTTCGTTTTGCCCT 113159 Query 9994 CGAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAAC 10053 || || || | |||||||||||| || || | | | | | ||||| | | Sbjct 113158 GCAGAGAGATCATCTCCATGAAGTCGAATGGCTGCGTCGAGTGGTAGTGCTTCTCCTCGC 113099 Query 10054 CGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGT 10113 |||| | | | ||||| || ||||||||||||||||| |||||| |||| || Sbjct 113098 CGAGCGACACCAGCAGCCGGTCCGCGACGAACTCGATGTACTGCGCCATCAGCTCCGCGT 113039 Query 10114 TCATGCCAATCATGCGGCAGGGGATG-GCGTCGCAAATGAAGTCCTTTTCGTTGGCGACC 10172 |||||||||||| || ||| || | |||||||| ||||| || ||| || ||| Sbjct 113038 TCATGCCAATCA-GCCGCACCGGCAGCGCGTCGCAGATGAACTCGCGCTCGATGTTCACC 112980 Query 10173 GCTTCCTCGACGATGCTCTTTACCACG---TCAAGGGACAGCTTGTTCTCGAGCTTCGAA 10229 || ||| ||||| ||| | |||| || | | |||||||| || || | ||| Sbjct 112979 GCATCC---ACGATAATCTCCAGCACGCGCTCGCGCGGCAGCTTGTGCTTGATGTGCGAG 112923 Query 10230 T---ACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTG 10286 | |||| || | | || | | ||| || ||||||||||| ||||| ||||||| Sbjct 112922 TTGTACAGCAGGCATGCGAAGTCCGTGTGTAGACCCTCGTCGCGCGAGATGAGCTCGTTG 112863 Query 10287 GACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGAC 10346 || ||| || ||||| || || || || ||||||||| | |||||||||||| Sbjct 112862 CTGAACGTCAGCCCTGGCATCAGACCGCGCTTCTTCAGCCAGAACAGCGCGCAGAACGAC 112803 Query 10347 CCGGAGAACAGAAGACCCTCCAC 10369 ||||| || | || |||||||| Sbjct 112802 CCGGAAAAGAAAATGCCCTCCAC 112780 >seq33 Length=364854 Score = 174 bits (192), Expect = 3e-38 Identities = 307/443 (69%), Gaps = 11/443 (2%) Strand=Plus/Plus Query 9934 TCATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCT 9993 |||| ||||| ||||||||||||||| ||| | |||||||||||| | ||||||| Sbjct 190121 TCATCACGCCGGCCTTCTGGTACTCCCCCACCTTCCTCTCGAAGAAGTTTGTTTTGCCCT 190180 Query 9994 CGAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAAC 10053 || || || | ||||||||| || || || | | | | | ||||| | | Sbjct 190181 GCAGCGAGATCATCTCCATGAATTCGAACGGCTGCGTCGAGTGGTAGTGCTTCTCCTCGC 190240 Query 10054 CGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGT 10113 |||| | | | ||||| || ||||||||||||||||| |||||| |||| || Sbjct 190241 CGAGCGACACCAGCAGCCGGTCCGCGACGAACTCGATGTACTGCGCCATCAGCTCCGCGT 190300 Query 10114 TCATGCCAATCATGCGGCAGGGGATG-GCGTCGCAAATGAAGTCCTTTTCGTTGGCGACC 10172 |||||||||||| || ||| || | |||||||| ||||| || ||| || ||| Sbjct 190301 TCATGCCAATCA-GCCGCACCGGCAGCGCGTCGCAGATGAACTCGCGCTCGATGTTCACC 190359 Query 10173 GCTTCCTCGACGATGCTCTTTACCACG---TCAAGGGACAGCTTGTTCTCGAGCTTCGAA 10229 || ||| ||||| ||| | |||| || | | |||||||| || || | ||| Sbjct 190360 GCATCC---ACGATAATCTCCAGCACGCGCTCGCGCGGCAGCTTGTGCTTGATGTGCGAG 190416 Query 10230 T---ACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTG 10286 | |||| || | | || | | ||| || ||||||||||| ||||| ||||||| Sbjct 190417 TTGTACAGCAGGCATGCGAAGTCCGTGTGTAGACCCTCGTCGCGCGAGATGAGCTCGTTG 190476 Query 10287 GACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGAC 10346 || ||| || ||||| || || || || ||||||||| | |||||||||||| Sbjct 190477 CTGAACGTCAGCCCTGGCATCAGACCGCGCTTCTTCAGCCAGAACAGCGCGCAGAACGAC 190536 Query 10347 CCGGAGAACAGAAGACCCTCCAC 10369 ||||| || | || |||||||| Sbjct 190537 CCGGAAAAGAAAATGCCCTCCAC 190559 >seq4 Length=1102922 Score = 163 bits (180), Expect = 5e-35 Identities = 177/232 (76%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||||| |||| ||| ||||||||||| || |||||||| || || ||| Sbjct 384281 CCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGAG 384340 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || || | || ||||| || || Sbjct 384341 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG 384400 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 ||||| |||||||| || ||||| ||||| ||| |||||| ||||| ||| | || || Sbjct 384401 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATCGTGTC-GCTCGGCTCCAC 384459 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 |||| | ||| || || || || || ||||| ||||| ||||||||| || Sbjct 384460 CTCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATTGTG 384511 >seq14 Length=517377 Score = 161 bits (178), Expect = 2e-34 Identities = 174/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||||| |||| ||| ||||||||||| || |||||||| || || ||| Sbjct 230923 CCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGAG 230864 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || || | || ||||| || || Sbjct 230863 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG 230804 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 ||||| |||||||| || ||||| ||||| ||| |||||| ||||| ||| | || || Sbjct 230803 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATCGTGTC-GCTCGGCTCCAC 230745 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| | ||| || || || || || ||||| ||||| |||||||| Sbjct 230744 CTCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 230697 >seq12 Length=572832 Score = 156 bits (172), Expect = 8e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||||| |||| ||| ||||||||||| || |||||||| || || ||| Sbjct 485366 CCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGAG 485307 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || || | || ||||| || || Sbjct 485306 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG 485247 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 ||||| |||||||| || ||||| ||||| || |||||| ||||| ||| | || || Sbjct 485246 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTC-GCTCGGCTCCAC 485188 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| | ||| || || || || || ||||| ||||| |||||||| Sbjct 485187 CTCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 485140 >seq2 Length=1084633 Score = 125 bits (138), Expect = 1e-23 Identities = 305/457 (67%), Gaps = 4/457 (1%) Strand=Plus/Plus Query 31701 CACACCGCCGTTTCGTCCGTAGAAGTGTATTCGACAATCTCGGCACAAAGATTGCTGCCC 31760 ||||||||||| || | || || ||||| ||||||||||| | || || || || | Sbjct 752412 CACACCGCCGTCTCCTGCGGCGACGTGTACTCGACAATCTCCGTGCATAGGTTCGAGCAC 752471 Query 31761 GTGATGGTGCCGGCATTGGACTGCATGTTCTTCACGTT-CACGCTGTCCTTGTTGAGCAC 31819 |||| ||||| ||| ||| | ||| ||| || || |||||||| ||| | Sbjct 752472 TTGATCGTGCCAAGATTCTTCTGGTTCGACTTGCTGTTGCATGC-GTCCTTGTAGAGGAT 752530 Query 31820 GTAAGGCATGCCCGTCTCGATCTGCGTGATGATCATCGCATTCCAGACATCGCGCGCTTT 31879 | | ||| ||||||||||||||||| | || ||| ||| || || | || | Sbjct 752531 GAACGGCCCGCCCGTCTCGATCTGCGACTCCAGGATGGCAAACCACACCTCCTGGGCCTG 752590 Query 31880 GA-CGACTTTCTTCGCACGCCCCTCGGACTCGTAGCGAAGATACAGGTCCTCGTACTCCT 31938 || || ||| | | || ||||||||||||||||| || || ||| |||||| Sbjct 752591 GATCGTCTTGACGC-CGCGGCCCTCGGACTCGTAGCGCTCGTAGAGCCGCTCAAACTCCT 752649 Query 31939 TGCCAAAGGCATCGGTTAGACCGGGACACTCCTTGGGGTCGAAGAGCGACCATGCGACAT 31998 ||| || |||| | || || || ||| ||||| || | |||| ||| | | Sbjct 752650 CACCATAGCAATCGCTGAGGCCCGGGCACGTGTTGGGATCCATCAGCGTCCACTTCCCCT 752709 Query 31999 CGGCCTCTACTCGCTTCATGAACAGGTCGTTCAGCCACATCGCGTAAAACAGATTCCTGG 32058 || | || ||| |||| ||||| || | ||||| ||| || || || | | || Sbjct 752710 CGCTTTTCACACGCCTCATAAACAGATCTGGGATCCACAGCGCATAGAAGAGGTCGCGGG 752769 Query 32059 CGCGTTGGGTCTCCTCACCCTGGTTACGTCGGAGCAGCAGGAAGTCCATGATGTCGGGGT 32118 |||| ||| || | ||| ||| ||| |||||||| ||| | | || ||||| || Sbjct 752770 CGCGCTGGTCATCTTTTCCCGTGTTGCGTTTCAGCAGCAGAAAGCCAAAGACGTCGGCGT 752829 Query 32119 GGTGGGGCTCGAGGTACACGGCGAAAGATCCCTTGCG 32155 | ||||||||| || ||||| || | |||||||| Sbjct 752830 GCCAGGGCTCGAGATAGACGGCAAAGGCGCCCTTGCG 752866 Score = 87.8 bits (96), Expect = 3e-12 Identities = 303/473 (64%), Gaps = 0/473 (0%) Strand=Plus/Plus Query 176025 ATGAGGCGCTTCACATTGTCTACGATATCCTTGGGGTTGTAAGCCGGAATGTTAGTGCTA 176084 |||||||||| | ||| | ||| ||| |||||||| ||| ||| | ||||| Sbjct 179720 ATGAGGCGCTCGAGGTTGCTGATGATCTCCAGCGGGTTGTAGTTCGGGATGCTTGTGCTG 179779 Query 176085 AATCCTGTTCCTATTCCTGACGATCCATTCACCAGGAGAAACGGGATGGTGGGAACATAG 176144 || || || || || || | || || |||||||| | | ||||||| |||| ||| Sbjct 179780 AACCCGGTGCCGATGCCCGTCGTGCCGTTCACCAGCACCATCGGGATGACCGGAATGTAG 179839 Query 176145 TATTCCGGTTCAATCCGGTCGCCGTCATCCTCGAGGTAGTTCAGCAGACGCTCGTCGGCC 176204 | || || | | | ||||| || || ||| | | || | ||||||||| Sbjct 179840 AAGAAAGGCTCCACCGAGAGACCGTCGTCGTCCTTGTACTCGACCACAAAGTCGTCGGCC 179899 Query 176205 TTGTGGAAAATATCCCGGGTGTTGGGGGACAGTTGTGTGAAGATATACCTAGCAGACGCA 176264 ||| || || |||||| | | || | |||||||| || | | | || Sbjct 179900 GGGTGAAAGATGGCCCGGGCGACCTGCATGAGCCGGGTGAAGATGTAGCGGCCCGCGGCG 179959 Query 176265 CTGTCCTTGCCTCCGTGAAGGCGGGAACCGAATTGTCCGCGAGGAAGAAGCAAATTGATG 176324 ||||||||| ||||| || || | |||||| || || | |||| || | Sbjct 179960 TGGTCCTTGCCACCGTGCAGACGCGTACCGAACTGACCATCCTTGCGCAGCAGCGGGACG 180019 Query 176325 TTATTCGAACCCACGTAGTCTTGGGCCATTCCGACTATGGCGCCCTGGAGAGACGCCTCG 176384 || || ||||| |||| || ||||||||||| || | | ||| ||| |||| Sbjct 180020 TTGTTGCTGCCCACAAAGTCCTGCGCCATTCCGACGATCGTCTGCACGAGCGACTGCTCG 180079 Query 176385 CCGTGGTGATAGCCGGCGTTCTCACTTGTGTATCCGGCAAACTGCGCGACTTTGATTTCT 176444 || ||||| || ||| || ||| ||| || |||| |||| | || ||||| Sbjct 180080 CCATGGTGGTACGCGGAGTGCTCCGAGACGTAGCCAGCAAGCTGCACCACCTTGATAGAG 180139 Query 176445 TGTACGAGGTTGCGCTTCAACGCCGAGAACAGAATCTTCCGCTGCGAGGGCTT 176497 | || | ||||||||| || |||||||| ||||| ||||| |||||| Sbjct 180140 TTCACCAAGTTGCGCTTGAAGCAGGAGAACAGGATCTTGCGCTGGCCGGGCTT 180192 >seq36 Length=332054 Score = 87.8 bits (96), Expect = 3e-12 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 84463 TAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCAC 84520 |||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||| Sbjct 287597 TAGCTCAGTCGGTAGAGCGCACGGCTCTTAACCGTGTGGTCGTGGGTTCGATCCCCAC 287654 >seq27 Length=395578 Score = 87.8 bits (96), Expect = 3e-12 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 84463 TAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCAC 84520 |||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||| Sbjct 128953 TAGCTCAGTCGGTAGAGCGCACGGCTCTTAACCGTGTGGTCGTGGGTTCGATCCCCAC 128896 >seq7 Length=802966 Score = 87.8 bits (96), Expect = 3e-12 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 84463 TAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCAC 84520 |||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||| Sbjct 341856 TAGCTCAGTCGGTAGAGCGCACGGCTCTTAACCGTGTGGTCGTGGGTTCGATCCCCAC 341799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921618529185920