Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq2 338 1e-87 seq72 279 1e-69 seq33 279 1e-69 >seq2 Length=1084633 Score = 338 bits (374), Expect = 1e-87 Identities = 976/1473 (66%), Gaps = 49/1473 (3%) Strand=Plus/Plus Query 244010 GAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCC 244069 ||||| |||| ||||| || | | ||||| |||||||| || || | |||| Sbjct 751740 GAGCCATTGTAAGAGATGATCTCGTTTCGCATCGACTCGTTCCATAGACC-ACGCGCGAT 751798 Query 244070 -AGCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTG 244128 || || ||| |||| | ||||||| || | ||||| || |||||| ||||| Sbjct 751799 GAGGTCCATGACGAGGTACTTGTTCACAACAGGGAACTCGCCGCTCAGCACACGGCGGAC 751858 Query 244129 GTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCT 244188 ||||| ||| | ||| ||||||| || ||| ||||||| || ||||||| ||| Sbjct 751859 GTAGATGTTCGAGGTGAAGGGCTCGAAGCACTCGTTGTTGCCGAGAATCTGCGAGGTGGA 751918 Query 244189 CGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTGGATG-CGGA 244247 ||| || |||||||| | |||||||| ||| | || ||| | ||| || | Sbjct 751919 CGCGGTTGGCATGGGGGCAACCAGCAGGGAGTTGCGCATGCC---CACCTGCATCACCTT 751975 Query 244248 GTC--TGAGCTCGTTCCAGTCCCACATGCCCGAGA-GGTCCTCGCGTTTGAGGCCCCACA 244304 || |||| | ||||||||| || | || || ||| || | ||||| Sbjct 751976 CTCCTTGAGGCTGGCCCAGTCCCAGCGACCGCTGTTGGGCCGCGCATTC----CTCCACA 752031 Query 244305 TGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGT 244364 ||| |||||||| | |||| ||| | ||||||||| | ||||| ||| || || | Sbjct 752032 GGTCGAACTGCAGAATGCCCTCACTGGCCGGGCTGCCCGTGAAGGTCTCGTACGGGCCCT 752091 Query 244365 CGCGCTGGGCCAGCTTACAGCT-CTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATC 244423 | || ||||||| || | | |||| || || ||||||| || ||||||||| Sbjct 752092 CCTCCTTCGCCAGCTC-CATCGACGACTCGACCGCAGCAAAGTAGATCGTTTCGAAGATC 752150 Query 244424 ATCTTGTTCATGTCGCGG-GCCTT-GCCGCAGGTGAAGGGGATGCCCATCATCATGAAGA 244481 | ||||| ||| | |||| |||| || || || | | ||| | |||||| Sbjct 752151 TCCGCGTTCACC-CGCTGCGCCTCCGCCG-AGACAAACGGCAGCCGCATGAGGATGAAGG 752208 Query 244482 CGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCG-CATG 244540 |||| || || ||||||||||||| ||||||||| | || ||| |||| ||| | | Sbjct 752209 CGTCCGCGAGCCCCTGCACGCCGAGGCCGATGGGGCGGTTGCGCATGTTACTGCGGCGCG 752268 Query 244541 GCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATG 244600 | || | || ||||| |||||| ||| || || |||||||||||| |||||| || Sbjct 752269 CCGTCTCG-ACCGGGTAGTAGTTGCGGTCAATAACGCGGTTGAGGTTGCGTGTGATC-TG 752326 Query 244601 CG--GACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGA 244658 | | | ||| | || ||||| || || | || |||| || | | | Sbjct 752327 CTTTGTC-ACGGTGTAGAGAAGCTG---GTGGTTC----AG-----CTCG-CGCTTCTCA 752372 Query 244659 TCCTC-ACAAACTCGTTG-AGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGA 244716 | || || || || | || |||| | ||| |||||||| || ||| ||||| || Sbjct 752373 ACGTCGACGAAG-CGCGGCAGCGCGATGGAGGCGAGGTTGCACACCGCCGTCTCCTGCGG 752431 Query 244717 GTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTG 244776 ||||||| ||||||||| ||||| ||||| ||||||||| ||||| || | || Sbjct 752432 CGACGTGTACTCGACAATCTCCGTGCATAGGTTCGAGCACTTGATCGTGCCAAGATTCTT 752491 Query 244777 GTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAG 244836 || || |||||| |||||| |||||||||||||| ||||| ||||| || ||||||| Sbjct 752492 CTGGTTCGACTTGCTGTTGCATGCGTCCTTGTAGAGGATGAACGGCCCGCCCGTCTCGAT 752551 Query 244837 CTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCC 244896 ||| | | |||| | ||| | ||| |||| || |||| || | ||| Sbjct 752552 CTGCGACTCCAGGATGGCAAACCACACCTCCTGGGCCTGGATCGTCTTGACGCCGCGGCC 752611 Query 244897 CTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCC 244956 ||| | ||||||||| ||| || ||| ||||| || || ||| ||||| Sbjct 752612 CTCGGACTCGTAGCGCTCGTAGAGCCGCTCAAACTCCTCACCATAGCAATCGCTGAGGCC 752671 Query 244957 GGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAA 245016 ||||||| || ||| || |||||| || || || || | | ||| || Sbjct 752672 CGGGCACGTGTTGGGATCCATCAGCGTCCACTTCCCCTCGCTTTTCACACGCCTCATAAA 752731 Query 245017 GAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGT 245076 || || |||||||| || || | ||||||||| | || | ||| || || || || Sbjct 752732 CAGATCTGGGATCCACAGCGCATAGAAGAGGTCGCGGGCGCGCTGGTCATCTTTTCCCGT 752791 Query 245077 GTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGC 245136 ||| ||||| || |||| ||||||||||| ||||||||||||| | ||||| || Sbjct 752792 GTTGCGTTTCAGCAGCAGAAAGCCAAAGACGTCGGCGTGCCAGGGCTCGAGATAGACGGC 752851 Query 245137 GAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG----CGTTGA 245192 | |||||| ||||| ||| |||||||||| | | || ||| ||||| Sbjct 752852 AAAGGCGCCCTTGCGCTTACCGCCACCCTGGTCCA----CGTAGCGGGCGGTGTTGTTGA 752907 Query 245193 AGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGC 245252 ||| ||| || | ||||| | ||||| || |||||| || || |||||| || Sbjct 752908 AGACGCGTAGCATTGGCACGAGCCCGTTCGACGTGCCGTTCGTACCAGCTATGTAGCTGC 752967 Query 245253 CCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGG 245312 || | | || |||| | | || ||| | |||||||| ||| ||| | | Sbjct 752968 CCGCCGCGCGGATGTTGTGCACGTGCAGGCCAATGCCGCCGGCCGCTTTGCTGATCACCG 753027 Query 245313 CGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAA 245372 |||| ||| | |||||| ||||| || |||||||| |||| | ||| | Sbjct 753028 CGCACTCCTTCAGGGTGTCGTAGATGCCGTCGATGCTGTCTTCCTTCGACGCCACCAGGA 753087 Query 245373 AGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGG 245432 |||| ||| || || ||||| ||| ||| | ||| || || || ||| ||||||||| Sbjct 753088 AGCACGAGCTCATTTGCGGCTTCGGGGTGCCGGCGTTAAAGAGGGTCGGGGTGGCGTGGG 753147 Query 245433 TAAAGTAGCGGCTCGAGAGGAACCCGTACGTCT 245465 | ||| ||| |||| | || ||||||||| Sbjct 753148 TGAAGAAGCCCTTCGACATGAGGTCGTACGTCT 753180 >seq72 Length=122406 Score = 279 bits (308), Expect = 1e-69 Identities = 590/867 (68%), Gaps = 15/867 (2%) Strand=Plus/Plus Query 42285 ATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCC 42344 ||| || |||| ||||||||| || ||||||| || | || || || |||||| | Sbjct 112345 ATCCAGTACCATGACATCTGGCGCAAGTACAAGGAGCAGGAGAGCTGCATCTGGACGGTG 112404 Query 42345 GAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAG 42404 |||||||| ||||| | ||| |||| | | ||||| | ||| || || | Sbjct 112405 GAGGAGATCGACCTAGGCAACGACATGAAGGACTGGGCAACGCTGAACGACGGGGAGCGG 112464 Query 42405 TTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAAC 42464 ||| |||| | | || ||||||||||||| | ||||||||||||| ||||| Sbjct 112465 CACTTCATCAAGCATGTGCTTGCCTTCTTCGCCGGCAGCGACGGCATAGTCATCGAGAAT 112524 Query 42465 CTGGC-CACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTT 42523 || || || | | ||||||| || ||| || ||||||||| |||||||| || Sbjct 112525 CTTGCGCAGC-GCTTCATGAGCGACGTGAAGGTGCCAGAGGCGCGCGCGTTCTACGGGTT 112583 Query 42524 CCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACAT 42583 |||| | || |||||| | ||||| ||| |||| | ||||| |||||||||| Sbjct 112584 CCAGCTGATGATGGAGAACATCCACTCGGAGACGTACTCTGTGCTGCTGGACACGTACAT 112643 Query 42584 CCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAA 42643 | || || ||| ||||| | | || || ||||||| || |||||| | Sbjct 112644 CACAGACAGCGAGGAGAAGCTGCGGCTGCTGCACGCGATACAGACGATCCCGTGCATCCA 112703 Query 42644 GAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAG 42703 |||||||||||| ||||| | ||||||| ||| || || | | ||| | ||| | Sbjct 112704 GAAGAAGGCGGAGTGGGCCGTGCGGTGGATCGGGAGCAGCG-CG-AGCTTTCAG-GAGCG 112760 Query 42704 GCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTT 42763 |||| | | |||| |||| || |||||||| ||||| || || | ||| | | | || Sbjct 112761 GCTGATCGGCTTTGCCGCGGTGGAGGGCATTTTCTTTTCCGGGTCGTTCTGCGCGCTGTT 112820 Query 42764 CTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCA 42822 |||||| ||| || ||| | |||||| || || || ||| ||||| |||||| Sbjct 112821 CTGGCTGAAGAAGCGCGGTCT-GATGCCAGGGCTGACGTTCAGCAACGAGCTCATCTCGC 112879 Query 42823 GGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGT---TCTCGAGCCACCTCAGGC 42879 | |||||||| || || | |||||| || ||||| |||| |||| ||| ||| || Sbjct 112880 GCGACGAGGGTCTACACACGGACTTCGCATGCCTGCTGTACAACTCG---CACATCAAGC 112936 Query 42880 ACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGG 42939 |||||| || ||||| || | || || ||| ||| || ||| | |||||| | Sbjct 112937 ACAAGCTGCCGCGCGAGCGCGTGCTGGAGATTATCGTGGATGCGGTGAACATCGAGCGCG 112996 Query 42940 AGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCA 42999 ||||| || | ||||||| ||| ||| | ||||||||| || || ||| Sbjct 112997 AGTTCATCTGCGACGCGCTGCCGGTGCGGCTGATTGGCATGAACGCGGAGCTGATGGCGC 113056 Query 43000 AGTACATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTAC 43058 |||||||| ||| |||||| |||| || || ||| | || || | | |||| Sbjct 113057 AGTACATCGAGTTCGTCGCGGACCGGCTGCTGGTGTCGCTCGGCGAGGAGAAG-CACTAC 113115 Query 43059 AACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTT 43118 || || || || |||||||| ||||||| ||||| || ||||||| || ||||| Sbjct 113116 CACTCGACGCAGCCATTCGACTTCATGGAGATGATCTCTCTGCAGGGCAAAACGAACTTC 113175 Query 43119 TTCGAGAAGCGCGTCGCCGACTACCAG 43145 ||||||||| | || | || |||||| Sbjct 113176 TTCGAGAAGAGGGTGGGGGAGTACCAG 113202 >seq33 Length=364854 Score = 279 bits (308), Expect = 1e-69 Identities = 578/847 (68%), Gaps = 15/847 (2%) Strand=Plus/Minus Query 42285 ATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCC 42344 ||| || |||| ||||||||| || ||||||| || | || || || |||||| | Sbjct 190994 ATCCAGTACCATGACATCTGGCGCAAGTACAAGGAGCAGGAGAGCTGCATCTGGACGGTG 190935 Query 42345 GAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAG 42404 |||||||| ||||||| ||| |||| | | ||||| | ||| || || | Sbjct 190934 GAGGAGATCGACCTGGGCAACGACATGAAGGACTGGGCAACGCTGAACGACGGGGAGCGG 190875 Query 42405 TTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAAC 42464 ||| |||| | | || ||||||||||||| | ||||||||||||| ||||| Sbjct 190874 CACTTCATCAAGCATGTGCTTGCCTTCTTCGCCGGCAGCGACGGCATAGTCATCGAGAAT 190815 Query 42465 CTGGC-CACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTT 42523 || || || | | ||||||| || ||| || ||||||||| |||||||| || Sbjct 190814 CTTGCGCAGC-GCTTCATGAGCGACGTGAAGGTGCCAGAGGCGCGCGCGTTCTACGGGTT 190756 Query 42524 CCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACAT 42583 |||| | || |||||| | ||||| ||| |||| | ||||| |||||||||| Sbjct 190755 CCAGCTGATGATGGAGAACATCCACTCGGAGACGTACTCTGTGCTGCTGGACACGTACAT 190696 Query 42584 CCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAA 42643 | ||| || ||| ||||| | | || || ||||||| || |||||| | Sbjct 190695 CACGGACAGCGAGGAGAAGCTGCGGCTGCTGCACGCGATACAGACGATCCCGTGCATCCA 190636 Query 42644 GAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAG 42703 |||||||||||| ||||| | ||||||| ||| || || | | ||| | ||| | Sbjct 190635 GAAGAAGGCGGAGTGGGCCGTGCGGTGGATCGGGAGCAGCG-CG-AGCTTTCAG-GAGCG 190579 Query 42704 GCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTT 42763 |||| | | |||| |||| || |||||||| ||||| || || | ||| | | | || Sbjct 190578 GCTGATCGGCTTTGCCGCGGTGGAGGGCATTTTCTTTTCCGGGTCGTTCTGCGCGCTGTT 190519 Query 42764 CTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCA 42822 |||||| ||| || ||| | |||||| || || || ||| ||||| |||||| Sbjct 190518 CTGGCTGAAGAAGCGCGGTCT-GATGCCAGGGCTGACGTTCAGCAACGAGCTCATCTCGC 190460 Query 42823 GGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGT---TCTCGAGCCACCTCAGGC 42879 | |||||||| || || | |||||| || ||||| |||| |||| ||| ||| || Sbjct 190459 GCGACGAGGGTCTACACACGGACTTCGCATGCCTGCTGTACAACTCG---CACATCAAGC 190403 Query 42880 ACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGG 42939 |||||| || ||||| || | || || ||| ||| || ||| | |||||| | Sbjct 190402 ACAAGCTGCCGCGCGAGCGCGTGCTGGAGATTATCGTGGATGCGGTGAACATCGAGCGCG 190343 Query 42940 AGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCA 42999 ||||| || | ||||||| ||| ||| | ||||||||| || || ||| Sbjct 190342 AGTTCATCTGCGACGCGCTGCCGGTGCGGCTGATTGGCATGAACGCGGAGCTGATGGCGC 190283 Query 43000 AGTACATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTAC 43058 |||||||| ||| |||||| |||| || || ||| | || || | | |||| Sbjct 190282 AGTACATCGAGTTCGTCGCGGACCGGCTGCTGGTGTCGCTCGGCGAGGAGAAG-CACTAC 190224 Query 43059 AACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTT 43118 || || || || ||||| || ||||||| |||||| || ||||||| || ||||| Sbjct 190223 CACTCGACGCAGCCGTTCGAATTCATGGAGATGATCTCGCTGCAGGGCAAAACAAACTTC 190164 Query 43119 TTCGAGA 43125 ||||||| Sbjct 190163 TTCGAGA 190157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944335233775360