Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq72 111 3e-19 seq33 107 4e-18 >seq72 Length=122406 Score = 111 bits (122), Expect = 3e-19 Identities = 293/442 (66%), Gaps = 9/442 (2%) Strand=Plus/Plus Query 243319 GTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGT 243378 || || || ||| | ||||||||| |||||||| | || |||||| ||| ||| Sbjct 112780 GTGGAGGGCATTTTCTTTTCCGGGTCGTTCTGCGCGCTGTTCTGGCTGAAGAAGCGCGGT 112839 Query 243379 GTGATGCCTGGCCT--CGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCACC 243436 ||||||| || || || || | |||||| ||||| ||||||||||| || ||| Sbjct 112840 CTGATGCCAGGGCTGACGTTCAGC--AACGAGCTCATCTCGCGCGACGAGGGTCTACACA 112897 Query 243437 AACAGTTCGGTGAGCTTATGTAT---TCAAAGCTCCAGAACAAGCTACCATTCGAAACGG 243493 | |||| || |||| || | || || ||||||| || ||| | Sbjct 112898 CGGACTTCGCATGCCTGCTGTACAACTCGCACATCAAGCACAAGCTGCCGCGCGAGCGCG 112957 Query 243494 TCAAACAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTC 243553 | | || ||| || || || | | ||| || ||||| |||||||| | | Sbjct 112958 TGCTGGAGATTATCGTGGATGCGGTGAACATCGAGCGCGAGTTCATCTGCGACGCGCTGC 113017 Query 243554 CATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCG 243613 | ||||| |||||||||||| | || || |||| ||||||||||| ||||| || | Sbjct 113018 CGGTGCGGCTGATTGGCATGAACGCGGAGCTGATGGCGCAGTACATCGAGTTCGTCGCGG 113077 Query 243614 ACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCT 243673 |||| | | | |||| || | ||||| ||| |||| | | | || || | || Sbjct 113078 ACCGGCTGCTGGTGTCGCTCGGCGAGGAGAAGCACTACCACTCGACGCAGCCATTCGACT 113137 Query 243674 TTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATT 243733 | |||||| | || || || || || ||||| ||||||||||| ||| | || | || | Sbjct 113138 TCATGGAGATGATCTCTCTGCAGGGCAAAACGAACTTCTTCGAGAAGAGGGTGGGGGAGT 113197 Query 243734 ATCA-ACGCCCTGGTGTGATGA 243754 | || | | || || ||||||| Sbjct 113198 ACCAGAAGGCC-GGCGTGATGA 113218 >seq33 Length=364854 Score = 107 bits (118), Expect = 4e-18 Identities = 267/403 (66%), Gaps = 7/403 (2%) Strand=Plus/Minus Query 243319 GTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGT 243378 || || || ||| | ||||||||| |||||||| | || |||||| ||| ||| Sbjct 190559 GTGGAGGGCATTTTCTTTTCCGGGTCGTTCTGCGCGCTGTTCTGGCTGAAGAAGCGCGGT 190500 Query 243379 GTGATGCCTGGCCT--CGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCACC 243436 ||||||| || || || || | |||||| ||||| ||||||||||| || ||| Sbjct 190499 CTGATGCCAGGGCTGACGTTCAGC--AACGAGCTCATCTCGCGCGACGAGGGTCTACACA 190442 Query 243437 AACAGTTCGGTGAGCTTATGTAT---TCAAAGCTCCAGAACAAGCTACCATTCGAAACGG 243493 | |||| || |||| || | || || ||||||| || ||| | Sbjct 190441 CGGACTTCGCATGCCTGCTGTACAACTCGCACATCAAGCACAAGCTGCCGCGCGAGCGCG 190382 Query 243494 TCAAACAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTC 243553 | | || ||| || || || | | ||| || ||||| |||||||| | | Sbjct 190381 TGCTGGAGATTATCGTGGATGCGGTGAACATCGAGCGCGAGTTCATCTGCGACGCGCTGC 190322 Query 243554 CATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCG 243613 | ||||| |||||||||||| | || || |||| ||||||||||| ||||| || | Sbjct 190321 CGGTGCGGCTGATTGGCATGAACGCGGAGCTGATGGCGCAGTACATCGAGTTCGTCGCGG 190262 Query 243614 ACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCT 243673 |||| | | | |||| || | ||||| ||| |||| | | | || || | | Sbjct 190261 ACCGGCTGCTGGTGTCGCTCGGCGAGGAGAAGCACTACCACTCGACGCAGCCGTTCGAAT 190202 Query 243674 TTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGA 243716 | |||||| | || ||||| || || ||||| ||||||||||| Sbjct 190201 TCATGGAGATGATCTCGCTGCAGGGCAAAACAAACTTCTTCGA 190159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102875252101600