Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq72 114 2e-20 seq33 114 2e-20 >seq72 Length=122406 Score = 114 bits (126), Expect = 2e-20 Identities = 159/222 (72%), Gaps = 3/222 (1%) Strand=Plus/Minus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||| ||||||||||| || |||||||| || || ||| ||| |||||||| ||||| Sbjct 112896 GTGTAGACCCTCGTCGCGCGAGATGAGCTCGTTGCTGAACGTCAGCCCTGGCATCAGACC 112837 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||||| |||||| | ||| || || || || || ||||| || |||||||| Sbjct 112836 GCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCCGGAAAAGAAAATGCCCTCCACCGC 112777 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTCATCGC 126237 || || | | || ||||| || ||| || | | | | |||| || || Sbjct 112776 GGCAAAGCCGATCAGCCGCTCCTGAA---AGCTCGCGCTGCTCCCGATCCACCGCACGGC 112720 Query 126238 CCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 126279 ||||| |||||| |||| ||| ||||||| ||||| ||||| Sbjct 112719 CCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGTATCGC 112678 >seq33 Length=364854 Score = 114 bits (126), Expect = 2e-20 Identities = 159/222 (72%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||| ||||||||||| || |||||||| || || ||| ||| |||||||| ||||| Sbjct 190443 GTGTAGACCCTCGTCGCGCGAGATGAGCTCGTTGCTGAACGTCAGCCCTGGCATCAGACC 190502 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||||| |||||| | ||| || || || || || ||||| || |||||||| Sbjct 190503 GCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCCGGAAAAGAAAATGCCCTCCACCGC 190562 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTCATCGC 126237 || || | | || ||||| || ||| || | | | | |||| || || Sbjct 190563 GGCAAAGCCGATCAGCCGCTCCTGAA---AGCTCGCGCTGCTCCCGATCCACCGCACGGC 190619 Query 126238 CCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 126279 ||||| |||||| |||| ||| ||||||| ||||| ||||| Sbjct 190620 CCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGTATCGC 190661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597351091114880