Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2 250 2e-61 >seq2 Length=1084633 Score = 250 bits (276), Expect = 2e-61 Identities = 513/754 (68%), Gaps = 14/754 (2%) Strand=Plus/Minus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 |||||||||||||| || ||||| || |||||| ||| || ||| ||||| |||||| Sbjct 753142 GCCACCCCGACCCTCTTTAACGCCGGCACCCCGAAGCCGCAAATGAGCTCGTGCTTCCTG 753083 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 || || |||| ||| |||| ||| || | ||||| ||| ||||| || ||| Sbjct 753082 GTGGCGTCGAAGGAAGACAGCATCGACGGCATCTACGACACCCTGAAGGAGTGCGCGGTG 753023 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 ||| ||| || || || || || | || ||| || | || || ||| | Sbjct 753022 ATCAGCAAAGCGGCCGGCGGCATTGGCCTGCACGTGCACAACATCCGCGCGGCGGGCAGC 752963 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 ||||| ||||| || ||||| || ||||| ||||| || ||||| || ||||||||| Sbjct 752962 TACATAGCTGGTACGAACGGCACGTCGAACGGGCTCGTGCCAATGCTACGCGTCTTCAAC 752903 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 ||| | || |||||||||||||||||||| || | | | ||||| | || || |||||| Sbjct 752902 AACACCGCCCGCTACGTGGACCAGGGTGGCGGTAAGCGCAAGGGCGCCTTTGCCGTCTAT 752843 Query 94192 CTCGAGCCCTGGCACGCGGACGT-GCAGGCTTTCATCGACCTGC-GAAA-GAACCAC-GG 94247 ||||||||||||||||| ||||| ||||||| |||| |||| | | ||| || Sbjct 752842 CTCGAGCCCTGGCACGCCGACGTCTTTGGCTTTC----TGCTGCTGAAACGCAACACGGG 752787 Query 94248 CAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTAT 94307 || ||| || | ||| | ||||||||||| || || ||| | ||||| || ||||| Sbjct 752786 AAAAGATGACCAGCGCGCCCGCGACCTCTTCTATGCGCTGTGGATCCCAGATCTGTTTAT 752727 Query 94308 GAAACGCGTCGAGAAAAACTCCG---CCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGG 94364 | | |||| | ||||| | | |||| || | |||||| || || || Sbjct 752726 G--AGGCGT-GTGAAAAGCGAGGGGAAGTGGACGCTGATGGATCCCAACACGTGCCCGGG 752670 Query 94365 ACTGTCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG 94424 || ||| | ||| | ||||| | || | || ||||| || |||| Sbjct 752669 CCTCAGCGATTGCTATGGTGAGGAGTTTGAGCGGCTCTACGAGCGCTACGAGTCCGAGGG 752610 Query 94425 CAAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGT 94484 | | | ||| || | || | || ||||| | ||| |||| ||| | Sbjct 752609 CCGCGGCGTCAAGACGATCCAGGCCCAGGAGGTGTGGTTTGCCATCCTGGAGTCGCAGAT 752550 Query 94485 GGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCA 94544 |||||||| ||| | |||| | | ||||||| | |||| |||||| |||||| | Sbjct 752549 CGAGACGGGCGGGCCGTTCATCCTCTACAAGGACGCATGCAACAGCAAGTCGAACCAGAA 752490 Query 94545 GCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCC 94604 | | || || ||||||| ||||||| || ||||| |||||||||||||| || || || Sbjct 752489 GAATCTTGGCACGATCAAGTGCTCGAACCTATGCACGGAGATTGTCGAGTACACGTCGCC 752430 Query 94605 GGACGAGATTGCTGTGTGTAACCTGGGCTCCATC 94638 | | |||| || ||||| ||||| | ||||||| Sbjct 752429 GCAGGAGACGGCGGTGTGCAACCTCGCCTCCATC 752396 Score = 113 bits (124), Expect = 4e-20 Identities = 116/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 95089 AACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAAC 95148 ||| | ||||| || ||||||||||| || || ||||| ||||||| || ||||||||| Sbjct 751951 AACTCCCTGCTGGTTGCCCCCATGCCAACCGCGTCCACCTCGCAGATTCTCGGCAACAAC 751892 Query 95149 GAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTC 95208 |||| ||||| ||||||||||| ||| | ||| | | || ||||| ||| || ||| Sbjct 751891 GAGTGCTTCGAGCCCTTCACCTCGAACATCTACGTCCGCCGTGTGCTGAGCGGCGAGTTC 751832 Query 95209 CCCGTCATCAACAAGCACCTCCTACGGGACCT 95240 || || | |||||| ||||| | |||||| Sbjct 751831 CCTGTTGTGAACAAGTACCTCGTCATGGACCT 751800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494721122162560