Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2 347 1e-90 seq72 154 1e-32 seq33 154 1e-32 seq14 91.5 1e-13 seq12 91.5 1e-13 seq4 89.7 5e-13 >seq2 Length=1084633 Score = 347 bits (384), Expect = 1e-90 Identities = 611/869 (70%), Gaps = 27/869 (3%) Strand=Plus/Plus Query 153597 GCAATAGACGCCAGATTACAGACGGCCGTCTCTT-CGGCGTCGCTGTACTGCACGATCTC 153655 || || || || || || || || |||||||| | ||||| || |||||| || ||||| Sbjct 752394 GCGATGGAGGCGAGGTTGCACACCGCCGTCTCCTGCGGCGACG-TGTACTCGACAATCTC 752452 Query 153656 GGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCA 153715 | ||| ||||| ||| || || ||| | ||| | ||| || |||| ||||| Sbjct 752453 CGTGCATAGGTTCGAGCACTTGATCGTGCCAAGATTCTTCTGGTTCGACTTGCTGTTGCA 752512 Query 153716 CGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT---AAA 153772 ||||| ||| |||| ||| |||| ||||| ||||||| |||| || | ||| ||| Sbjct 752513 TGCGTCCTTGTAGAGGATGAACGGCCCGCCCGTCTCGATCTGCGACTCCAGGATGGCAAA 752572 Query 153773 CCTATGCAGGTCCTGCGCTCGCACCCGCT-GCCGATAGCGGCCCTCGCTCTCGTATCGCT 153831 || || ||||| || | | | || | || |||||||||| |||||| |||| Sbjct 752573 CCA---CACCTCCTGGGCCTGGATCGTCTTGACGCC-GCGGCCCTCGGACTCGTAGCGCT 752628 Query 153832 CGTACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACAC-TGATGCGGA 153890 |||| || ||||||||||| || || ||||| ||| |||||| || ||| || || ||| Sbjct 752629 CGTAGAGCCGCTCAAACTCCTCACCATAGCAATCGCTGAGGCCCGGGCACGTGTTG-GGA 752687 Query 153891 CACATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAG 153950 |||||||| |||| | | ||| || || || | ||| |||||||| || | ||| Sbjct 752688 TCCATCAGCGTCCACTTCCCCTCGCTTTTCACACGCCTCATAAACAGATCTGGGATCCAC 752747 Query 153951 AGCGCGTACATGAGGTCGC--GCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGAT 154008 ||||| || | |||||||| |||| || || || ||| ||||||||||||| Sbjct 752748 AGCGCATAGAAGAGGTCGCGGGCGCGCTG--GTCATCTTTTCCCGTGTTGCGTTTCAGCA 752805 Query 154009 TGAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTAC 154068 || | || | ||| ||||||||||||||| || | |||||||| | ||| || || | Sbjct 752806 GCAGAAAGCCAAAGACGTCGGCGTGCCAGGGCTCGAGATAGACGGCAAAGGCGCCCTTGC 752865 Query 154069 GCTTTCCG---CCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTT 154125 |||| ||| ||||| || |||| ||| | | |||||||||||||| | ||| || Sbjct 752866 GCTTACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTGTTGAAGACGCGTAGCATTGGCA 752925 Query 154126 CCAGGCCGCTTGCGGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGAT 154185 | || ||| | | |||||||| || | || | |||||| ||||| | | | Sbjct 752926 CGAGCCCGTTCGACGTGCCGTTCGTACCAGCTATGTAGCTGCCCGCCGCGCGGATGTTGT 752985 Query 154186 GCACGTTAACGCCAATGCCGCC-GCCGTACTTTGAT-ATGGCAGCGCAGTCGCCCAGCGT 154243 |||||| | |||||||||||| |||| ||||| | || | ||||| || ||| || Sbjct 752986 GCACGTGCAGGCCAATGCCGCCGGCCG--CTTTGCTGATCACCGCGCACTCCTTCAGGGT 753043 Query 154244 CCTGTAGATGCCGTCGATGCTATCGT-CGCGGACGCCGAGCAAGAAACACGAACACATTT 154302 |||||||||||||||||| || | | |||||| | || ||| ||||| | ||||| Sbjct 753044 GTCGTAGATGCCGTCGATGCTGTCTTCCTTCGACGCC-ACCAGGAAGCACGAGCTCATTT 753102 Query 154303 GCGGAATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGT-AAACAGTTTTTGG 154361 |||| | | || || || ||||||||| || | ||||| || || || || | Sbjct 753103 GCGGCTTCGGGGTGCCGGCGTTAAAGAGGGTCGGGGTGGCGTGGGTGAAGAAGCCCTTCG 753162 Query 154362 CTCATCATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCG 154421 ||| | | |||||| || ||| | || ||| |||||||||||||||| ||| Sbjct 753163 -ACATGAGGTCGTACGTCTCACGCACGTTCTTGAGATCTGCGCCGTGAATGCCGAGAGCG 753221 Query 154422 ACGCGCATGAGCATGTGCTGCGGACGTTC 154450 || ||||||| ||| ||||| ||||| || Sbjct 753222 ACACGCATGAACATCTGCTGTGGACGCTC 753250 >seq72 Length=122406 Score = 154 bits (170), Expect = 1e-32 Identities = 366/539 (68%), Gaps = 13/539 (2%) Strand=Plus/Plus Query 52304 GCTGCTGAATGCGTTCGAGCACG-TGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGA 52362 ||||||| | ||| | || ||| | |||||| | | || ||||| ||||||| || Sbjct 112668 GCTGCTGCACGCGATACAG-ACGATCCCGTGCATCCAGAAGAAGGCGGAGTGGGCCGTGC 112726 Query 52363 AGTGGATCGAGAGCGACACCGCCACGCTGGCCG-AGCGCATGGTGGCCTTCGCCATAGTC 52421 |||||||| |||| | ||| | ||| | | |||| || | | ||| ||| || Sbjct 112727 GGTGGATCGGGAGC---AGCGCGA-GCTTTCAGGAGCGGCTGATCGGCTTTGCCGCGGTG 112782 Query 52422 GAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATA 52481 |||||| | || |||||||| || ||| | || | | || | | || | Sbjct 112783 GAGGGCATTTTCTTTTCCGGGTCGTTCTGCGCGCTGTTCTGGCTGAAGAAGCGCGGTCTG 112842 Query 52482 ATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGAC 52541 ||||| || |||||||||||||||||| | || ||||||||||| || || ||||||||| Sbjct 112843 ATGCCAGGGCTGACGTTCAGCAACGAGCTCATCTCGCGCGACGAGGGTCTACACACGGAC 112902 Query 52542 TTTGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATTGGATTCGGA-CACGATCCT 52600 || || ||||| ||||| ||| | | | | || || || | || | Sbjct 112903 TTCGCATGCCTGCTGTACAACTCGCACATCAAGCACAAGCTGCCGCGCGAGCGCGTGCTG 112962 Query 52601 GAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGT 52660 ||| || || ||| |||||| ||||| ||||| | | |||||||||||| Sbjct 112963 GAG-ATTATCGTGGATGCGGTGAACATCGAGCGCGAGTTCATCTGCGACGCGCTGCCGGT 113021 Query 52661 CGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCG-AGTACATCGAGTTTGTGGCGGATC 52719 |||| | |||||||||||| || ||| ||| ||||||||||||| || ||||| | Sbjct 113022 GCGGCTGATTGGCATGAACGCGGAGCTGATG-GCGCAGTACATCGAGTTCGTCGCGGACC 113080 Query 52720 GTCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTCAACGC-TCGCAATCCGTTTGAGTTT 52778 | ||| ||||| |||||| || ||| ||| | || | ||| | || || || || Sbjct 113081 GGCTGCTGGTGTCGCTCGGCGAGGAGAAGCACTACCACTCGACGC-AGCCATTCGACTTC 113139 Query 52779 ATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 ||| | | || || || ||||||| || ||||| ||||||||| | || || ||||| Sbjct 113140 ATGGAGATGATCTCTCTGCAGGGCAAAACGAACTTCTTCGAGAAGAGGGTGGGGGAGTA 113198 >seq33 Length=364854 Score = 154 bits (170), Expect = 1e-32 Identities = 366/539 (68%), Gaps = 13/539 (2%) Strand=Plus/Minus Query 52304 GCTGCTGAATGCGTTCGAGCACG-TGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGA 52362 ||||||| | ||| | || ||| | |||||| | | || ||||| ||||||| || Sbjct 190671 GCTGCTGCACGCGATACAG-ACGATCCCGTGCATCCAGAAGAAGGCGGAGTGGGCCGTGC 190613 Query 52363 AGTGGATCGAGAGCGACACCGCCACGCTGGCCG-AGCGCATGGTGGCCTTCGCCATAGTC 52421 |||||||| |||| | ||| | ||| | | |||| || | | ||| ||| || Sbjct 190612 GGTGGATCGGGAGC---AGCGCGA-GCTTTCAGGAGCGGCTGATCGGCTTTGCCGCGGTG 190557 Query 52422 GAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATA 52481 |||||| | || |||||||| || ||| | || | | || | | || | Sbjct 190556 GAGGGCATTTTCTTTTCCGGGTCGTTCTGCGCGCTGTTCTGGCTGAAGAAGCGCGGTCTG 190497 Query 52482 ATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGAC 52541 ||||| || |||||||||||||||||| | || ||||||||||| || || ||||||||| Sbjct 190496 ATGCCAGGGCTGACGTTCAGCAACGAGCTCATCTCGCGCGACGAGGGTCTACACACGGAC 190437 Query 52542 TTTGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATTGGATTCGGA-CACGATCCT 52600 || || ||||| ||||| ||| | | | | || || || | || | Sbjct 190436 TTCGCATGCCTGCTGTACAACTCGCACATCAAGCACAAGCTGCCGCGCGAGCGCGTGCTG 190377 Query 52601 GAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGT 52660 ||| || || ||| |||||| ||||| ||||| | | |||||||||||| Sbjct 190376 GAG-ATTATCGTGGATGCGGTGAACATCGAGCGCGAGTTCATCTGCGACGCGCTGCCGGT 190318 Query 52661 CGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCG-AGTACATCGAGTTTGTGGCGGATC 52719 |||| | |||||||||||| || ||| ||| ||||||||||||| || ||||| | Sbjct 190317 GCGGCTGATTGGCATGAACGCGGAGCTGATG-GCGCAGTACATCGAGTTCGTCGCGGACC 190259 Query 52720 GTCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTCAACGC-TCGCAATCCGTTTGAGTTT 52778 | ||| ||||| |||||| || ||| ||| | || | ||| | ||||| || || Sbjct 190258 GGCTGCTGGTGTCGCTCGGCGAGGAGAAGCACTACCACTCGACGC-AGCCGTTCGAATTC 190200 Query 52779 ATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 ||| | | || ||||| ||||||| || ||||| ||||||| | || || ||||| Sbjct 190199 ATGGAGATGATCTCGCTGCAGGGCAAAACAAACTTCTTCGAGAGGAAGGTGGGGGAGTA 190141 >seq14 Length=517377 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||| |||| |||| || | || | | |||||||| || ||||||||||| Sbjct 230924 GCCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGA 230865 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || ||||| || || || |||| |||| || ||||| |||||||| || Sbjct 230864 GAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGG 230805 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| || || | | || | |||||| ||| |||||| Sbjct 230804 GATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATCGTGTCGCTCGGCTCCAC 230745 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGG 138616 ||| | || | ||| || || ||||| || || || || |||||||||| Sbjct 230744 CTCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATGG 230695 >seq12 Length=572832 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||| |||| |||| || | || | | |||||||| || ||||||||||| Sbjct 485367 GCCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGA 485308 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || ||||| || || || |||| |||| || ||||| |||||||| || Sbjct 485307 GAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGG 485248 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| || || | | || | |||||| ||| |||||| Sbjct 485247 GATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGCTCGGCTCCAC 485188 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGG 138616 ||| | || | ||| || || ||||| || || || || |||||||||| Sbjct 485187 CTCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATGG 485138 >seq4 Length=1102922 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 138386 AGCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGC 138445 ||||||| |||| |||| || | || | | |||||||| || ||||||||||| Sbjct 384279 AGCCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCG 384338 Query 138446 TCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505 | || || ||||| || || || |||| |||| || ||||| |||||||| | Sbjct 384339 AGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCG 384398 Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 | || || || ||||| ||| || || | | || | |||||| ||| ||||| Sbjct 384399 GGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATCGTGTCGCTCGGCTCCA 384458 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | ||| || || ||||| || || || || |||||||| Sbjct 384459 CCTCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 384507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496260315697920