Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq72 111 2e-19 seq33 105 8e-18 >seq72 Length=122406 Score = 111 bits (122), Expect = 2e-19 Identities = 350/539 (65%), Gaps = 34/539 (6%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 ||| ||||| |||| ||||||||||||||| || || || | || ||| ||||||| Sbjct 113199 GTACTCCCCCACCCTCTTCTCGAAGAAGTTCGTTTTGCCCTGCAGAGAGATCATCTCCAT 113140 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAGGAGACG 127350 || || ||||| | | | |||| | | | | || | | || || || Sbjct 113139 GAAGTCGAATGGCTGCGTCGAGTGGTAGTGCTTCTCCTCGCCGAGCGACACCAGCAGCCG 113080 Query 127351 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACA 127410 |||| |||| |||| ||||||| | |||| ||| | |||||| || || || Sbjct 113079 GTCCGCGACGAACTCGATGTACTGCGCCATCAGCTCCGCGTTCATGCCAATCAGCCGCAC 113020 Query 127411 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGTG 127470 || |||||||| |||||||| | ||| |||| ||| || ||| ||||| Sbjct 113019 CGGCAGCGCGTCGCAGATGAACTCGCGCTCGATGTTCACCGCATCC---ACGAT------ 112969 Query 127471 AATAGTGTCCACCCCAGGTCTATTGCGTAAAGT----CTTGAAG----AGTTCCACAGCA 127522 | | |||| | | | || ||| | | ||||| | |||| |||||| Sbjct 112968 ---AATCTCCAGCACGCG-CTCGCGCGGCAGCTTGTGCTTGATGTGCGAGTTGTACAGCA 112913 Query 127523 --------AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACA 127574 || || ||| ||||||||||| || |||||||| || || ||| || Sbjct 112912 GGCATGCGAAGTCCGTGTGTAGACCCTCGTCGCGCGAGATGAGCTCGTTGCTGAACGTCA 112853 Query 127575 GACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGA 127634 | |||||||| ||||| |||||||||| |||||| | ||| || || || || || |||| Sbjct 112852 GCCCTGGCATCAGACCGCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCCGGAAAAGA 112793 Query 127635 AGATCCCCTCCACACACGCGAACGCAAAT-AGACGCTCGGCAAAGGAGCGGGACTTTGTA 127693 | || |||||||| | || || || || || ||||| || ||| | | | Sbjct 112792 AAATGCCCTCCAC-CGCGGCAAAGCCGATCAGCCGCTCCTGAA---AGCTCGCGCTGCTC 112737 Query 127694 TCAAACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC 127752 | | |||| || ||||||| ||||| |||| ||| || |||| ||||| ||||| Sbjct 112736 CCGATCCACCGCACGGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGTATCGC 112678 >seq33 Length=364854 Score = 105 bits (116), Expect = 8e-18 Identities = 159/223 (71%), Gaps = 5/223 (2%) Strand=Plus/Plus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 ||| ||||||||||| || |||||||| || || ||| ||| |||||||| ||||| Sbjct 190443 GTGTAGACCCTCGTCGCGCGAGATGAGCTCGTTGCTGAACGTCAGCCCTGGCATCAGACC 190502 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||||| |||||| | ||| || || || || || ||||| || |||||||| | Sbjct 190503 GCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCCGGAAAAGAAAATGCCCTCCAC-CG 190561 Query 127651 CGCGAACGCAAAT-AGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCG 127709 || || || || || ||||| || ||| | | | | | |||| || | Sbjct 190562 CGGCAAAGCCGATCAGCCGCTCCTGAA---AGCTCGCGCTGCTCCCGATCCACCGCACGG 190618 Query 127710 CCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC 127752 |||||| ||||| |||| ||| || |||| ||||| ||||| Sbjct 190619 CCCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGTATCGC 190661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613504623269760