Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq33 289 3e-73 seq72 282 4e-71 seq4 132 5e-26 seq14 131 2e-25 seq12 127 2e-24 >seq33 Length=364854 Score = 289 bits (320), Expect = 3e-73 Identities = 579/835 (69%), Gaps = 26/835 (3%) Strand=Plus/Plus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||||||||| || || || || |||||||| |||| || || || ||||| |||| Sbjct 190122 CATCACGCCGGCCTTCTGGTACTCCCCCACCTTCCTCTCGAAGAAGTTTGTTTTGCCCTG 190181 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGT---GCC 132707 || || || | | ||| || || || || | | | || ||||||||| ||| Sbjct 190182 CAGCGAGATCATCTCCATGAATTCGAACGGCTGCGTCGAGTGGTAGTGCTTCTCCTCGCC 190241 Query 132708 GATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGC 132766 || | | | || ||||||| ||| || |||||||||||||| |||| ||| | | ||| Sbjct 190242 GAGC--GAC-ACCAGCAGCCGGTCCGCGACGAACTCGATGTACTGCGCCATCAGCTCCGC 190298 Query 132767 AATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGA-GAAAGCGTTGCTCGATGGCG 132825 | | | || | ||| |||||||||||||| ||| || ||| || |||||||| Sbjct 190299 GTTCATG-CCAATCAGCCGCACCGGCAGCGCGTCGCAGATGAACTCGC-GCTCGATGTTC 190356 Query 132826 ACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCT-CGGCCGTTGCACCAAATGC-- 132882 ||||| || || || ||| |||||| | |||| | || ||| | ||| Sbjct 190357 ACCGCATCCACGATAATCTCCAGCACGCGCTC-GCGCGGCAGCTTGTGCTTGATGTGCGA 190415 Query 132883 -TTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTT 132941 ||| ||| || ||| || ||||| || | |||||||| | || ||||| ||||| Sbjct 190416 GTTGTACAGCAGGCATGCGAAGTCCGTGTGTAGACCCTCGTCGCGCGAGATGAGCTCGTT 190475 Query 132942 GCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACT 133001 |||||| |||| || ||||| || ||||| || || ||||| || | ||| ||| Sbjct 190476 GCTGAACGTCAGCCCTGGCATCAGACCGCGCTTCTTCAGCCAGAACAGCGCGCAGAACGA 190535 Query 133002 GCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCC-ACCAGGCGCTCGCCGAACGTGG 133060 || |||||||| | |||||| || || || |||||| | ||| ||||| | ||| | Sbjct 190536 CCCGGAAAAGAAAATGCCCTCCACCGCGGC-AAAGCCGATCAGCCGCTC-CTGAAAG--- 190590 Query 133061 CTT-CTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATC 133119 || | |||| ||||||| |||| ||||| || ||||| | | || |||||| ||| Sbjct 190591 CTCGCGCTGCTCCCGATCCACCGCACGGCCCACTCCGCCTTCTTCTGGATGCACGGGATC 190650 Query 133120 GTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC-ACGTAGGTGTCGAT 133178 || | || |||| || || || || ||||| || | | || | ||| ||||| | Sbjct 190651 GTCTGTATCGCGTGCAGCAGCCGCAGCTTCTCCTC-GCTGTCCGTGATGTACGTGTCCAG 190709 Query 133179 GAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCA 133238 || || ||| | |||||||| | ||||||||| | || || ||||| || Sbjct 190710 CAGCACAGAGTACGTCTCCGAGTGGATGTTCTCCATCATCAGCTGGAACCCGTAGAACGC 190769 Query 133239 CCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGAT 133298 |||||||| ||||| ||| || ||| |||| | ||||| ||| |||| || Sbjct 190770 GCGCGCCTCTGGCACCTTCACGTCGCTCATGAAGCGCTGCGCAAGATTCTCGATGACTAT 190829 Query 133299 GCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTT 133358 |||||||||| ||||||| ||||| ||||| ||||||||||| || ||||| |||||| Sbjct 190830 GCCGTCGCTGCCGGCGAAGAAGGCAAGCACATGCTTGATGAAGTGCCGCTCCCCGTCGTT 190889 Query 133359 CAAGCGCT-CCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCA 133412 | |||| | ||||||| | |||| ||| |||||| | |||||| || ||||| Sbjct 190890 C-AGCGTTGCCCAGTCCTTCATGTCGTTGCCCAGGTCGATCTCCTCCACCGTCCA 190943 >seq72 Length=122406 Score = 282 bits (312), Expect = 4e-71 Identities = 575/834 (69%), Gaps = 24/834 (3%) Strand=Plus/Minus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||||||||| || || || || |||||| | ||||| || || || ||||| |||| Sbjct 113217 CATCACGCCGGCCTTCTGGTACTCCCCCACCCTCTTCTCGAAGAAGTTCGTTTTGCCCTG 113158 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGT---GCC 132707 || || || | | ||| || || || || | | | || ||||||||| ||| Sbjct 113157 CAGAGAGATCATCTCCATGAAGTCGAATGGCTGCGTCGAGTGGTAGTGCTTCTCCTCGCC 113098 Query 132708 GATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGC 132766 || | | | || ||||||| ||| || |||||||||||||| |||| ||| | | ||| Sbjct 113097 GAGC--GAC-ACCAGCAGCCGGTCCGCGACGAACTCGATGTACTGCGCCATCAGCTCCGC 113041 Query 132767 AATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGA-GAAAGCGTTGCTCGATGGCG 132825 | | | || | ||| |||||||||||||| ||| || ||| || |||||||| Sbjct 113040 GTTCATG-CCAATCAGCCGCACCGGCAGCGCGTCGCAGATGAACTCGC-GCTCGATGTTC 112983 Query 132826 ACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCT-CGGCCGTTGCACCAAATGC-- 132882 ||||| || || || ||| |||||| | |||| | || ||| | ||| Sbjct 112982 ACCGCATCCACGATAATCTCCAGCACGCGCTC-GCGCGGCAGCTTGTGCTTGATGTGCGA 112924 Query 132883 -TTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTT 132941 ||| ||| || ||| || ||||| || | |||||||| | || ||||| ||||| Sbjct 112923 GTTGTACAGCAGGCATGCGAAGTCCGTGTGTAGACCCTCGTCGCGCGAGATGAGCTCGTT 112864 Query 132942 GCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACT 133001 |||||| |||| || ||||| || ||||| || || ||||| || | ||| ||| Sbjct 112863 GCTGAACGTCAGCCCTGGCATCAGACCGCGCTTCTTCAGCCAGAACAGCGCGCAGAACGA 112804 Query 133002 GCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCC-ACCAGGCGCTCGCCGAACGTGG 133060 || |||||||| | |||||| || || || |||||| | ||| ||||| | ||| | Sbjct 112803 CCCGGAAAAGAAAATGCCCTCCACCGCGGC-AAAGCCGATCAGCCGCTC-CTGAAAG--- 112749 Query 133061 CTT-CTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATC 133119 || | |||| ||||||| |||| ||||| || ||||| | | || |||||| ||| Sbjct 112748 CTCGCGCTGCTCCCGATCCACCGCACGGCCCACTCCGCCTTCTTCTGGATGCACGGGATC 112689 Query 133120 GTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATG 133179 || | || |||| || || || || ||||| || | | ||| ||||| | Sbjct 112688 GTCTGTATCGCGTGCAGCAGCCGCAGCTTCTCCTCGCTGTCTGTGATGTACGTGTCCAGC 112629 Query 133180 AGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCAC 133239 || || ||| | |||||||| | ||||||||| | || || ||||| || Sbjct 112628 AGCACAGAGTACGTCTCCGAGTGGATGTTCTCCATCATCAGCTGGAACCCGTAGAACGCG 112569 Query 133240 CGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATG 133299 |||||||| ||||| ||| || ||| |||| | ||||| ||| |||| ||| Sbjct 112568 CGCGCCTCTGGCACCTTCACGTCGCTCATGAAGCGCTGCGCAAGATTCTCGATGACTATG 112509 Query 133300 CCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTC 133359 ||||||||| ||||||| ||||| ||||| ||||||||||| || ||||| ||||||| Sbjct 112508 CCGTCGCTGCCGGCGAAGAAGGCAAGCACATGCTTGATGAAGTGCCGCTCCCCGTCGTTC 112449 Query 133360 AAGCGCT-CCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCA 133412 |||| | ||||||| | |||| ||| ||||| | |||||| || ||||| Sbjct 112448 -AGCGTTGCCCAGTCCTTCATGTCGTTGCCTAGGTCGATCTCCTCCACCGTCCA 112396 >seq4 Length=1102922 Score = 132 bits (146), Expect = 5e-26 Identities = 171/231 (74%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || ||||| || ||||| || ||| | | || || ||| | | Sbjct 384508 AATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCGCTGGAGGTGGAGCCGAG 384449 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-AC 38360 ||||| | | |||| | || | || |||| ||||| ||||| || ||||||| || Sbjct 384448 CGACACGATCGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGCAT-CCCGCCGGAC 384391 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| || || | ||| ||||| |||||||| || | ||||| ||| |||||| Sbjct 384390 CAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTCTCGGACTAC 384331 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||||| ||||| | |||||||| |||||||||| || | |||||| Sbjct 384330 AACATCCAGAAGGAGTCCACGCTGCACCTGGTGCTGCGCCTGCGCGGCGGC 384280 >seq14 Length=517377 Score = 131 bits (144), Expect = 2e-25 Identities = 170/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| || ||||| || ||| | | || || ||| | | | Sbjct 230697 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCGCTGGAGGTGGAGCCGAGC 230756 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-ACC 38361 |||| | | |||| | || | || |||| ||||| ||||| || ||||||| ||| Sbjct 230757 GACACGATCGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGCAT-CCCGCCGGACC 230814 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | ||| ||||| |||||||| || | ||||| ||| ||||||| Sbjct 230815 AGCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTCTCGGACTACA 230874 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||| ||||| | |||||||| |||||||||| || | |||||| Sbjct 230875 ACATCCAGAAGGAGTCCACGCTGCACCTGGTGCTGCGCCTGCGCGGCGGC 230924 >seq12 Length=572832 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| || ||||| || ||| | | || || ||| | | | Sbjct 485140 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCGCTGGAGGTGGAGCCGAGC 485199 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-ACCA 38362 |||| | | | | || | || |||| ||||| ||||| || ||||||| |||| Sbjct 485200 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCAT-CCCGCCGGACCA 485258 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| ||||| |||||||| || | ||||| ||| |||||||| Sbjct 485259 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTCTCGGACTACAA 485318 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| ||||| | |||||||| |||||||||| || | |||||| Sbjct 485319 CATCCAGAAGGAGTCCACGCTGCACCTGGTGCTGCGCCTGCGCGGCGGC 485367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500170699274240