Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq11 196 6e-45 seq2 152 7e-32 seq85 136 5e-27 >seq11 Length=544400 Score = 196 bits (216), Expect = 6e-45 Identities = 734/1134 (65%), Gaps = 29/1134 (3%) Strand=Plus/Plus Query 7028 GCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCT 7087 || || |||| ||| ||||| || || |||||||||||||| || | ||||| || Sbjct 130477 GCCTGCACCGCCGCACCGTACGCAACGGCCTCATCGGGGTTGATGGAGCGGTTCAGCTCC 130536 Query 7088 TTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCG 7147 || ||| || | | ||| | || || || || || |||||||| |||||||||||| Sbjct 130537 TTGCCGCCGAAGAACTGCGAGACAATCTGCTGGATCTTTGGGATTCGGGTCGATCCACCG 130596 Query 7148 ACCAAAACGATTTCATTCACTTTC----GATTTATCGATCTTTGAGTCTCGAAGTGTTTT 7203 || | |||| || | ||| | | | || || ||| | ||| || || Sbjct 130597 ACGAGGACGACGTCGTCCACGTCCTGCGGCTTCAT--ATCC--GCATCTGCCAGCACCTT 130652 Query 7204 TTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACG 7263 | || || || | || || ||| || |||| ||||| || || || || Sbjct 130653 CTTCACCGGCTCGAGGCACTTCTCAAACTGATCGCGGCACATCTCCTCGAAGCGCGCGCG 130712 Query 7264 GGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTG 7323 || |||| | | ||| |||||| ||| | | || || || || || || | || Sbjct 130713 CGTGATGGTGGCCTGGAAGTCAACGTTCTCGAACAGCGCGTCGATCTCGATCGTCGCCTG 130772 Query 7324 TGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGC 7383 | || || || | ||| ||||| |||||||| |||||||| || | ||| || ||| Sbjct 130773 CGTCGCGGACGACAGCGTGCGCTTCGCGCGCTCGCACGCCGTGCGCAGACGGCGCGTGGC 130832 Query 7384 ACGCGGGTTACCG-GAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT-GT 7441 || | ||| ||| | | ||| | | | || | ||| | ||||| || Sbjct 130833 GCGGGCGTTGCCGCGGCAGTCCTTGCCGCAGCGCATCTTGAG-CTCAGTGGCGAAGTAGT 130891 Query 7442 CGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTG 7501 ||| | || | ||||| || || || || | ||| || || |||||||| || || Sbjct 130892 CGACG-AGGCGGTTGTCGAAGTCCTCGCCGCCAAGGTGCGTGTCACCCGCGGTTGCCTTT 130950 Query 7502 ACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGG 7561 || || || | || || || | | || || ||||| ||||| || || || ||| Sbjct 130951 ACCTCGAACACGCCGGACTCGATCGTCAGCAGCGTCACATCGAACGTGCCGCCGCCAAGG 131010 Query 7562 TCAAAAATGAGTACGTTCGTATCGT---CGTCTTTGTTCTTATCGAGACCGTACGCGATA 7618 || || || || ||||| || | |||| | | ||| || || ||||||||||| Sbjct 131011 TCGAAGATCAGCACGTTGCGCTCCTTGCCGTCGTCGCCCTTGTCCAGGCCGTACGCGATG 131070 Query 7619 GCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCA 7678 ||||| ||||| || || || || || || || ||| |||||||| || | | || Sbjct 131071 GCCGCTGCCGTCGGCTCGTTGATGATGCGCAGCACGTTGAGGCCAGCGATGGAGCCGGCG 131130 Query 7679 TCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCC 7738 || ||||| || || || ||||| ||||| ||||| ||||| ||||| || || || | | Sbjct 131131 TCCTTCGTTGCCTGGCGCTGCGAGTCGTTGAAGTACGCCGGCACCGTCACCACGGCCTTC 131190 Query 7739 GTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGAT 7798 | || | ||| || || |||| ||||| | || ||||| || || ||||| | Sbjct 131191 TTCACCTGCTTGCCCAGGTACGCCTCCGCCGTCTCCTTCATCTTCTGCAGCACCATAGCC 131250 Query 7799 GAAATCTCTTCAGCCGCAAACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCATGGG 7857 || ||||| || | | ||| || || || | | | || || || | || Sbjct 131251 GAGATCTCCTCTG-GGAAAAAGGTCTTGGTCTGGTTCTGGTACTCGACGCTGATGACCGG 131309 Query 7858 TTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATAT-CGTCT--TGGAC 7914 || ||| | | || ||||| | | ||| | ||||| | || || || | Sbjct 131310 CTT-GCCG--TCCTTGACGACCACCTTGAAGGGCCAGTGCTTCATGTCCGACTGAAGGTC 131366 Query 7915 CTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGG 7974 | | ||| ||||| | ||||| | ||||| || ||||| || ||||| | || Sbjct 131367 GGGATCGTC---GAACTTGCGGCCGATCATGCGCTTCGCGTCAAACACGGTGTTGCTCGG 131423 Query 7975 GTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAA 8034 ||||||||| |||||||| || || || ||||| || || || | || || || Sbjct 131424 GTTCATGGCCACCTGGTTCTTGGCGGCATCGCCGATCAGGCGCTC---TGTCTCGGTGAA 131480 Query 8035 CGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTC 8094 || || || || || || || || || || |||||||| ||||| || || || | || Sbjct 131481 GGCCACATAAGACGGCGTTGTGCGGTTACCCTGGTCGTTGGCAATGATGTCCACCTGCTC 131540 Query 8095 GTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 ||| | |||||||||||||||| ||||| || || | || || ||||| || Sbjct 131541 GTTCTTGAAGACGCCGACGCACGAGTACGTCGTGCCCAGGTCGATGCCGATGGC 131594 >seq2 Length=1084633 Score = 152 bits (168), Expect = 7e-32 Identities = 234/329 (71%), Gaps = 10/329 (3%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||| || |||||||| | ||| ||||| || ||||| || || |||| ||| Sbjct 622283 ATCGAAGTCCTCACCACCGAGGTGGGTATCACCGTTCGTCGCGACCACCTCGAAGAAACC 622342 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | || || | | || ||| ||||| ||||| || ||||| ||||| || | || | Sbjct 622343 CTCGTCGATTGTCAGCAGCGACACATCGAACGTGCCGCCACCGAGGTCGAAGACCAGGAT 622402 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 |||| | ||| | ||||||| || |||||||| || ||||||||||| || || Sbjct 622403 GTTCTTCTCGCCAGCTTTGTTA------AGCCCGTACGCTATGGCCGCCGCCGTGGGCTC 622456 Query 7636 ATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCA-TCTTTCGTCGCTTGT 7693 || || || | || ||| ||| ||||| || || || ||| | || ||||| || || Sbjct 622457 GTTGATGATGCGGACGAC-GTTAAGGCCGGCGAT-CTTACCGGAGTCCTTCGTTGCCTGG 622514 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 || |||| ||| |||||||| || || ||||||||||| || | | | || |||| ||| Sbjct 622515 CGCTGCGCATCATTAAAGTACGCTGGCACCGTTACGACGGCATTCTTCACCTTCTCGCCG 622574 Query 7754 AGATACGATTCCGCGATATCTTTCATTTT 7782 ||| | | || | ||| |||||||| || Sbjct 622575 AGAAAGGTCTCTGAGATCTCTTTCATCTT 622603 >seq85 Length=76128 Score = 136 bits (150), Expect = 5e-27 Identities = 163/221 (74%), Gaps = 3/221 (1%) Strand=Plus/Plus Query 7928 AACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTT 7987 ||||| | || || || ||||| || || || || ||||| | |||||||| || Sbjct 228 AACTTGCGGCCAATCAGGCGCTTCGCGTCGAACACCGTGTTGTGCGGGTTCATTGCCACC 287 Query 7988 TGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGAT 8047 |||||||| || || || ||||| || || || | |||| ||||| |||||||| Sbjct 288 TGGTTCTTTGCGGCATCGCCGATCAGCCGCTCCGAGT---CCGTGAACGCAACGTACGAC 344 Query 8048 GGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACG 8107 || ||||| || || || ||||||||||| || || || ||||| ||||| ||||| ||| Sbjct 345 GGTGTCGTGCGGTTACCCTGGTCGTTCGCGATGATATCCACGCGTTCGTTCTGCCACACG 404 Query 8108 CCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 || |||||||| ||||| || || | || || ||||| || Sbjct 405 CCCACGCACGAGTACGTCGTGCCCAGGTCGATGCCGATGGC 445 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 7619 GCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCA 7678 ||||||||||| || || || || || || || | |||||||||||| || | ||| Sbjct 8765 GCCGCCGCCGTCGGCTCGTTGATGATGCGCAGCACCTCCAGGCCAGCAATCGTCCCGGCA 8824 Query 7679 TCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCC 7738 || ||||| || || || ||||| ||||| ||||| ||||| ||||| || || || | | Sbjct 8825 TCCTTCGTTGCCTGGCGCTGCGAGTCGTTGAAGTACGCCGGCACCGTCACCACGGCCTTC 8884 Query 7739 GTGACTTTCTTACCGAGATAC 7759 | || | ||| || || ||| Sbjct 8885 TTCACCTGCTTGCCCAGGTAC 8905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635130132442240