Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq2 125 9e-24 >seq2 Length=1084633 Score = 125 bits (138), Expect = 9e-24 Identities = 557/865 (64%), Gaps = 19/865 (2%) Strand=Plus/Minus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 |||||| | ||||||||||| ||||| |||| || || || | |||| | | || Sbjct 753244 CCACAGCAGATGTTCATGCGTGTCGCTCTCGGCATTCACGGCGCAGATCTCAAGAACGTG 753185 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 ||||| |||||| ||||| || | |||| |||||| || || |||||||| Sbjct 753184 CGTGAGACGTACGACCTCATGTCGAAGGGCTTCTTCACCCACGCCACCCCGACCCTCTTT 753125 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 ||||| || || || | || |||||| | || ||||| | || ||||| || Sbjct 753124 AACGCCGGCACCCCGAAGCCGCAAATGAGCTCGTGCTTCCTGGTGGCGTCGAAGGAAGAC 753065 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCT-CAAAGTGGGCTGG 111850 ||| | ||||| |||| ||| || | || || || ||| ||||| || | || Sbjct 753064 AGCATCGACGGCATCTACGACACCCTGAAGGAGTGCGCGGTGATCAGCAAAGCGGCC-GG 753006 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGA-GGTACAA 111909 || || || ||||| | || | || | || | | | ||| ||||| | Sbjct 753005 CGGCATTGGCCTGCACGTGCACAACATCCGCGCGG-CGGGCAGCTACATAGCTGGTACGA 752947 Query 111910 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 111969 | || || | || | | |||||||| ||||| || ||| ||| || ||||| | Sbjct 752946 ACGGCACGTCGAACGGGCTCGTGCCAATGCTACGCGTCTTCAACAACACCGCCCGCTACG 752887 Query 111970 TAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACG 112026 | |||| | ||| || |||||||| | | || |||||||| ||||| ||||||| Sbjct 752886 TGGACCAGGGTGGCGGTAAGCGCAAGGGCGCCTTTGCCGTCTATCTCGAGCCCTGGCACG 752827 Query 112027 CGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCC 112086 | || || | | || || | || | |||| || | || || ||| || Sbjct 752826 CCGACGTCTTTGGCTTTCTGCTGCTGAAACGCAACACGGGAAAAGATGACCAGCGCGCCC 752767 Query 112087 GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG-GAGAGT 112145 |||| ||||||| || || ||||| |||||||| || |||| | | || | | ||| Sbjct 752766 GCGACCTCTTCTATGCGCTGTGGATCCCAGATCTGTTTATGAGGCGTGTGAAAAGCGAGG 752707 Query 112146 GGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAG 112205 || || ||| | || | ||| ||| | || || ||| |||| | |||||| Sbjct 752706 GG-AAGTGGACGCTGATGGATCCCAACACGTGCCCGGGCCTCAGCGATTGCTATGGTGAG 752648 Query 112206 GAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCG-GGCGACTGCGACGGTGCC 112264 |||||||| |||||| |||||| || | || |||| | |||| | || Sbjct 752647 GAGTTTGAGCGGCTCTACGAGCGCTACGAGTCCGAGGGCCGCGGCGTC-AAGACGAT-CC 752590 Query 112265 AGCTGCC---GATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 112321 || ||| || |||||| || || || |||| || | |||||| || || | Sbjct 752589 AG--GCCCAGGAGGTGTGGTTTGCCATCCTGGAGTCGCAGATCGAGACGGGCGGGCCGTT 752532 Query 112322 TATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 112381 || || ||||| ||||| || ||| ||| || || |||||| | || |||||| Sbjct 752531 CATCCTCTACAAGGACGCATGCAACAGCAAGTCGAACCAGAAGAATCTTGGCACGATCAA 752472 Query 112382 GAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAG-ATGAGACGGCTGTGT 112440 | | || ||||| || || || || | || | || | | | | |||||||| |||| Sbjct 752471 GTGCTCGAACCTATGCACGGAGATTGTCGAGTACAC-GTCGCCGCAGGAGACGGCGGTGT 752413 Query 112441 GTAACCTCGCATCAATCGCTCTCCC 112465 | |||||||| || ||||| || || Sbjct 752412 GCAACCTCGCCTCCATCGCGCTGCC 752388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620739792881920