Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq6 86.0 7e-12 seq275 84.2 3e-11 seq273 84.2 3e-11 >seq6 Length=876310 Score = 86.0 bits (94), Expect = 7e-12 Identities = 70/84 (83%), Gaps = 1/84 (1%) Strand=Plus/Plus Query 136706 CACCGTTCTTATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTT 136765 ||| | ||| |||||||||| ||||||||||||| || |||| |||||||||| |||| Sbjct 658565 CACGGCTCTCATAGCTCAGTCGGTTAGAGCGTGGGTCTAATAAGCCCAAGGTCACAGGTT 658624 Query 136766 CGAGCCCCGTTGGGAACAGCTTTT 136789 ||| ||| ||||||| || ||||| Sbjct 658625 CGACCCCTGTTGGGAGCA-CTTTT 658647 Score = 84.2 bits (92), Expect = 3e-11 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 136712 TCTTATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCC 136771 ||| |||||||||| ||||||||||||| || |||| |||||||||| ||||||| || Sbjct 656399 TCTCATAGCTCAGTCGGTTAGAGCGTGGGTCTAATAAGCCCAAGGTCACAGGTTCGACCC 656458 Query 136772 CCGTTGGGAACAGCTTTT 136789 | ||||||| || ||||| Sbjct 656459 CTGTTGGGAGCA-CTTTT 656475 >seq275 Length=5433 Score = 84.2 bits (92), Expect = 3e-11 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 136712 TCTTATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCC 136771 ||| |||||||||| ||||||||||||| || |||| |||||||||| ||||||| || Sbjct 1226 TCTCATAGCTCAGTCGGTTAGAGCGTGGGTCTAATAAGCCCAAGGTCACAGGTTCGACCC 1167 Query 136772 CCGTTGGGAACAGCTTTT 136789 | ||||||| || ||||| Sbjct 1166 CTGTTGGGAGCA-CTTTT 1150 >seq273 Length=5536 Score = 84.2 bits (92), Expect = 3e-11 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 136712 TCTTATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCC 136771 ||| |||||||||| ||||||||||||| || |||| |||||||||| ||||||| || Sbjct 4292 TCTCATAGCTCAGTCGGTTAGAGCGTGGGTCTAATAAGCCCAAGGTCACAGGTTCGACCC 4351 Query 136772 CCGTTGGGAACAGCTTTT 136789 | ||||||| || ||||| Sbjct 4352 CTGTTGGGAGCA-CTTTT 4368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588973526300800