Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq2 230 4e-55 seq33 203 6e-47 seq72 199 7e-46 >seq2 Length=1084633 Score = 230 bits (254), Expect = 4e-55 Identities = 804/1234 (65%), Gaps = 41/1234 (3%) Strand=Plus/Plus Query 212948 GTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCT 213007 ||| | ||| || ||| ||||||||| || ||||||||| || |||||||| | ||| Sbjct 751859 GTAGATGTTCGAGGTGAAGGGCTCGAAGCACTCGTTGTTGCCGAGAATCTGCGAGGTGGA 751918 Query 213008 GGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGG-- 213065 || || |||||||| || ||||| || ||| | || || || || || | Sbjct 751919 CGCGGTTGGCATGGGGGCAACCAGCAGGGAGTTGCGCATGCCCACCT-GC--ATCACCTT 751975 Query 213066 CGCC--GAAGCTCTGCCCAGTCCCATCTGCCAGACA-GGTCCTCGTCCTTCACGTTCCAC 213122 | || || ||| ||||||||||| | || || || || | ||| ||||| Sbjct 751976 CTCCTTGAGGCTG-GCCCAGTCCCAGCGACCGCTGTTGGGCCGCG-CATTCC---TCCAC 752030 Query 213123 ATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCA 213182 | ||| ||||||| ||||| | || | ||||||||| | | | ||| ||||| Sbjct 752031 AGGTCGAACTGCAGAATGCCCTCACTGGCCGGGCTGCCCGTGAAGGTCTCGTACGGGCCC 752090 Query 213183 TGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATC 213242 | |||||| |||||||| |||| || | ||||| ||||||| ||||| || ||| Sbjct 752091 TCCTCCTTCGCCAGCTCCATCGACGACTCGACCGCAGCAAAGTAGATCGTTTCGAAGATC 752150 Query 213243 TCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACA 213302 ||| ||| | | || ||||| | || || |||| | |||| | ||| | Sbjct 752151 TCCGCGTTCACCCGCTGCGCCTCCGCCGAGACAAACGGCAGCCGCATGAGGATGAAGGCG 752210 Query 213303 TCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTT-GGAGCA 213361 || || |||||||| || |||| ||||||||| | || | || |||| || || || Sbjct 752211 TCCGCGAGCCCCTGCACGCCGAGGCCGATGGGGCGGTTGCGCATGTTA--CTGCGGCGCG 752268 Query 213362 CTC-CTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTT 213420 | ||| | ||||| |||||| ||| || | |||||||||||| ||| | | Sbjct 752269 CCGTCTCGACCGGGTAGTAGTTGCGGTCAATAACGCGGTTGAGGTTGCGTGTGATCTGCT 752328 Query 213421 TGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAG 213480 | || || | || || ||| || | | || | | | | || || | Sbjct 752329 TTGTCACGGTGTAGAGAAGCTGGTGGTTCAGCTCGCGCTTCTCAACGTCGACGAAGCGCG 752388 Query 213481 GCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGA 213540 |||| |||||| ||| |||||||| || ||| |||||| | |||||||| | | Sbjct 752389 GCAGCGCGATGGAGGCGAGGTTGCACACCGCCGTCTCCTGCGGCGACGTGTACTCGACAA 752448 Query 213541 TCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGT 213600 |||| ||||| ||||| ||| ||| ||||| || |||| ||||| ||||| || Sbjct 752449 TCTCCGTGCATAGGTTCGAGCACTTGATCGTGCCAAGATTCTTCTGGTTCGACTTGCTGT 752508 Query 213601 TGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCT 213660 || | ||||||||||| ||| | || || ||||| | ||| ||| |||| || Sbjct 752509 TGCATGCGTCCTTGTAGAGGATGAACGGCCCGCCCGTCTCGATCTGCGACTCCAGGAT-- 752566 Query 213661 GGCT--CCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGT 213717 ||| ||| | | | ||||| || | | |||| || ||| | | | ||||| Sbjct 752567 GGCAAACCACACCTCCTGGGCCTGGATCGTCT---TGAC-GCCGCGGCCCTCGGACTCGT 752622 Query 213718 ACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGA---CCCTGTCCAGTCCCGGACAGG 213774 | | ||||||||| | || || | || || | ||| || ||||| || | Sbjct 752623 AGCGCTCGTAGAGCCGCTCAAACTCCTCACCATAGCAATCGCTG---AGGCCCGGGCACG 752679 Query 213775 ATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCG 213834 |||| ||| || |||| | ||| || | | || | | ||| ||||| || | Sbjct 752680 TGTTGGGATCCATCAGCGTCCACTTCCCCTCGCTTTTCACACGCCTCATAAACAGATCTG 752739 Query 213835 GGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTT---TT 213891 ||| ||||||||| ||| ||||| | || | | || || ||| | ||| || Sbjct 752740 GGATCCACAGCGCATAGAAGAGGTCGCGGGCGCGCTGGTCATCTTTTCCCGTGTTGCGTT 752799 Query 213892 TGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGG 213951 | |||| |||||| |||||| ||| |||||||| ||||| | |||| |||||||| Sbjct 752800 TCAGCAGC---AGAAAGCCAAAGACGTCGGCGTGCCAGGGCTCGAGATAGACGGCAAAGG 752856 Query 213952 CGCCCGGCCTCTT---GCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCA 214008 ||||| | ||| ||| ||||||||||| | ||| ||||||||| ||| | Sbjct 752857 CGCCCTTGCGCTTACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTGTTGAAGACGCGTA 752916 Query 214009 GGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC 214068 | | || || |||||||| ||| ||||| || || ||||| || ||| | || | Sbjct 752917 GCATTGGCACGAGCCCGTTCGACGTGCCGTTCGTACCAGCTATGTAGCTGCCCGCCGCGC 752976 Query 214069 TCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCC 214128 | |||| || | || || ||||| ||||| ||| ||||| ||||| | Sbjct 752977 GGATGTTGTGCACGTGCAGGCCAATGCCGCCGGCCGCTTTGCTGATCACCGCGCACTCCT 753036 Query 214129 TCACAGTCTCCATGATGCCGGCCATGCTGTCATC 214162 ||| || || ||||||| | |||||||| || Sbjct 753037 TCAGGGTGTCGTAGATGCCGTCGATGCTGTCTTC 753070 >seq33 Length=364854 Score = 203 bits (224), Expect = 6e-47 Identities = 566/855 (66%), Gaps = 15/855 (2%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| |||||||| | |||| ||||||||||| || |||| || |||||| |||| Sbjct 190137 CTGGTACTCCCCCACCTTCCTCTCGAAGAAGTTTGTTTTGCCCTGCAGCGAGATCATCTC 190196 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAG 47958 |||||| ||| || | | | || || | | ||| | | ||||||| Sbjct 190197 CATGAATTCGAACGGCTGCGTCGAGTGGTAGTGCTTCTCCTCGCCGAGCGACACCAGCAG 190256 Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018 | ||||||||| |||||||||| | | ||| || ||||||||| || || Sbjct 190257 CCGGTCCGCGACGAACTCGATGTACTGCGCCATCAGCTCCGCGTTCATGCCAATCAGCCG 190316 Query 48019 CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTG 48078 ||| |||| || | || ||||| ||| || | ||| || ||| | | ||||| Sbjct 190317 CACCGGCAGCGCGTCGCAGATGAACTCGCGCTCGATGTTCACCGCATCCACGATAATCTC 190376 Query 48079 CTTAACGCGGGACTCTGAGGGTTTGTTGCGC---AGGTGCTTGGCATAGAGCATGCAGGC 48135 | ||||| ||| || ||| || | |||| | || |||| ||| || Sbjct 190377 CAGCACGCG---CTCGCGCGGCAGCTTGTGCTTGATGTGCGAGTTGTACAGCAGGCATGC 190433 Query 48136 AAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGG 48195 |||||| |||| | || ||||| || ||||||| ||||| ||| || || || Sbjct 190434 GAAGTCCGTGTGTAGACCCTCGTCGCGCGAGATGAGCTCGTTGCTGAACGTCAGCCCTGG 190493 Query 48196 CATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCC 48255 ||| | || | || || |||||||| | || ||| || || || ||||| ||||| Sbjct 190494 CATCAGACCGCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCCGGAAAAGAAAATGCC 190553 Query 48256 CTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCA 48315 |||||| || || || || | |||| ||| | ||||| || || || |||||| Sbjct 190554 CTCCACCGCGGCAAAGCCGATCAGCCGCTC-CTGAAAGCT-CGCGCTGCTCCC-GATCCA 190610 Query 48316 GGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAG 48375 | ||||| || |||||||||| |||||| || ||||||| ||| || | | || Sbjct 190611 CCGCACGGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGTATCGCGTGCAGCAG 190670 Query 48376 CTTCTTGCACTCACCT-GC-GTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCA 48433 | | || || ||| || ||||| | || || |||||| | |||| |||| Sbjct 190671 CCGCA-GCT-TCTCCTCGCTGTCCGTGATGTACGTGTCCAGCAGCACAGAGTACGTCTCC 190728 Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493 ||||| | ||||| || | ||||||||||||||| || | ||||| ||||| | Sbjct 190729 GAGTGGATGTTCTCCATCATCAGCTGGAACCCGTAGAACGCGCGCGCCTCTGGCACCTTC 190788 Query 48494 ACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAG 48553 || || | ||| | || | |||||||| ||||||| || || | || ||| Sbjct 190789 ACGTCGCTCATGAAGCGCTGCGCAAGATTCTCGATGACTATGCCGTCGCTGCCGGCGAAG 190848 Query 48554 AAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGT 48613 |||||||| ||||| || | ||| || ||||| || | | || | |||| ||| Sbjct 190849 AAGGCAAGCACATGCTTGATGAAGTGCCGCTCCCCGTCGTTCAGCGTTGCCCAGTCCTTC 190908 Query 48614 ACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGA-CGCGAGTGCTTTTTTGTA 48672 | ||| ||||||||||| | || ||||| ||||||| | | | | ||| | ||||| Sbjct 190909 ATGTCGTTGCCCAGGTCGATCTCCTCCACCGTCCAGATGCAGCTCTCCTGC-TCCTTGTA 190967 Query 48673 CATGCCCCATATGTC 48687 | ||| ||| ||||| Sbjct 190968 CTTGCGCCAGATGTC 190982 >seq72 Length=122406 Score = 199 bits (220), Expect = 7e-46 Identities = 565/855 (66%), Gaps = 15/855 (2%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| |||||||| || ||||| |||||||| || || |||| || ||||| |||| Sbjct 113202 CTGGTACTCCCCCACCCTCTTCTCGAAGAAGTTCGTTTTGCCCTGCAGAGAGATCATCTC 113143 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAG 47958 ||||||| ||| || | | | || || | | ||| | | ||||||| Sbjct 113142 CATGAAGTCGAATGGCTGCGTCGAGTGGTAGTGCTTCTCCTCGCCGAGCGACACCAGCAG 113083 Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018 | ||||||||| |||||||||| | | ||| || ||||||||| || || Sbjct 113082 CCGGTCCGCGACGAACTCGATGTACTGCGCCATCAGCTCCGCGTTCATGCCAATCAGCCG 113023 Query 48019 CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTG 48078 ||| |||| || | || ||||| ||| || | ||| || ||| | | ||||| Sbjct 113022 CACCGGCAGCGCGTCGCAGATGAACTCGCGCTCGATGTTCACCGCATCCACGATAATCTC 112963 Query 48079 CTTAACGCGGGACTCTGAGGGTTTGTTGCGC---AGGTGCTTGGCATAGAGCATGCAGGC 48135 | ||||| ||| || ||| || | |||| | || |||| ||| || Sbjct 112962 CAGCACGCG---CTCGCGCGGCAGCTTGTGCTTGATGTGCGAGTTGTACAGCAGGCATGC 112906 Query 48136 AAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGG 48195 |||||| |||| | || ||||| || ||||||| ||||| ||| || || || Sbjct 112905 GAAGTCCGTGTGTAGACCCTCGTCGCGCGAGATGAGCTCGTTGCTGAACGTCAGCCCTGG 112846 Query 48196 CATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCC 48255 ||| | || | || || |||||||| | || ||| || || || ||||| ||||| Sbjct 112845 CATCAGACCGCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCCGGAAAAGAAAATGCC 112786 Query 48256 CTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCA 48315 |||||| || || || || | |||| ||| | ||||| || || || |||||| Sbjct 112785 CTCCACCGCGGCAAAGCCGATCAGCCGCTC-CTGAAAGCT-CGCGCTGCTCCC-GATCCA 112729 Query 48316 GGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAG 48375 | ||||| || |||||||||| |||||| || ||||||| ||| || | | || Sbjct 112728 CCGCACGGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGTATCGCGTGCAGCAG 112669 Query 48376 CTTCTTGCACTCACCT-GC-GTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCA 48433 | | || || ||| || ||| | | || || |||||| | |||| |||| Sbjct 112668 CCGCA-GCT-TCTCCTCGCTGTCTGTGATGTACGTGTCCAGCAGCACAGAGTACGTCTCC 112611 Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493 ||||| | ||||| || | ||||||||||||||| || | ||||| ||||| | Sbjct 112610 GAGTGGATGTTCTCCATCATCAGCTGGAACCCGTAGAACGCGCGCGCCTCTGGCACCTTC 112551 Query 48494 ACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAG 48553 || || | ||| | || | |||||||| ||||||| || || | || ||| Sbjct 112550 ACGTCGCTCATGAAGCGCTGCGCAAGATTCTCGATGACTATGCCGTCGCTGCCGGCGAAG 112491 Query 48554 AAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGT 48613 |||||||| ||||| || | ||| || ||||| || | | || | |||| ||| Sbjct 112490 AAGGCAAGCACATGCTTGATGAAGTGCCGCTCCCCGTCGTTCAGCGTTGCCCAGTCCTTC 112431 Query 48614 ACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGA-CGCGAGTGCTTTTTTGTA 48672 | ||| ||||| ||||| | || ||||| ||||||| | | | | ||| | ||||| Sbjct 112430 ATGTCGTTGCCTAGGTCGATCTCCTCCACCGTCCAGATGCAGCTCTCCTGC-TCCTTGTA 112372 Query 48673 CATGCCCCATATGTC 48687 | ||| ||| ||||| Sbjct 112371 CTTGCGCCAGATGTC 112357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931528887562240