Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq2 176 8e-39 seq72 170 4e-37 seq33 170 4e-37 >seq2 Length=1084633 Score = 176 bits (194), Expect = 8e-39 Identities = 571/871 (66%), Gaps = 33/871 (4%) Strand=Plus/Plus Query 221713 GGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAG 221772 ||| ||||| ||||| ||| ||| | | || |||| | ||||| || || || Sbjct 752402 GGCGAGGTTGCACACCGCCGTCTCCTGCGGCGACGTGTACTCGACAATCTCCGTGCATAG 752461 Query 221773 GTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTT 221832 ||| ||||||||| || || || | || || || ||||||| ||| |||||||| Sbjct 752462 GTTCGAGCACTTGATCGTGCCAAGATTCTTCTGGTTCGACTTGCTGTTGCATGCGTCCTT 752521 Query 221833 GTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTC 221892 |||||| || || || ||||| ||||| | ||| | | |||| || ||| | || Sbjct 752522 GTAGAGGATGAACGGCCCGCCCGTCTCGATCTGCGACTCCAGGATGGCAAACCACACCTC 752581 Query 221893 TCTGGCGCTCACCGTCCTCTTGACTGCAC---CCTCGGTCTTTTCATACCCGGTATAGAG 221949 |||| || || ||||||| | | |||||| || | | || ||||| Sbjct 752582 -CTGGGCCTGGA--TCGTCTTGACGCCGCGGCCCTCGGACTCGTAGCGCTCG---TAGAG 752635 Query 221950 CATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAG 222009 | ||||||| ||||| || ||| ||||| || ||| || |||| |||||| Sbjct 752636 CCGCTCAAACTCCTCACCATAGCAATCGCTGAGGCCCGGGCACGTGTTGGGATCCATCAG 752695 Query 222010 ACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTG 222069 |||| | | | | ||| || | | ||| || || || |||||||||||||| | Sbjct 752696 CGTCCACTTCCCCTCGCTTTTCACACGCCTCATAAACAGATCTGGGATCCACAGCGCATA 752755 Query 222070 AAAGAGATCTCTGGTCCGCTGCTCCTCCACGCC---GTTGTTTTTCCTCAGATCCAAAAA 222126 ||||| || | || ||||| || || || |||| |||| ||| || ||| Sbjct 752756 GAAGAGGTCGCGGGCGCGCTGGTCATCTTTTCCCGTGTTGCGTTTCAGCAG---CAGAAA 752812 Query 222127 CTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTT 222186 |||| | ||| |||||||| ||||| ||||||||||| | ||||| ||||| Sbjct 752813 GCCAAAGACGTCGGCGTGCCAGGGCTCGAGATAGACGGCAAAGGCGCCCTTGCGCTTACC 752872 Query 222187 GCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCC 222246 ||||||||| ||||| | | |||||||| ||| || | || || || || Sbjct 752873 GCCACCCTGGTCCACGTAGCGGGCGGTGTTGTTGAAGACGCGTAGCATTGGCACGAGCCC 752932 Query 222247 GTTGGATCGACCGTTGGTGCCCTTAATGTA-CGCACCGCCGGCCCTCAGGTT----ACTG 222301 ||| || ||||| || || ||||| | ||||| || | | ||| || Sbjct 752933 GTTCGACGTGCCGTTCGTACCAGCTATGTAGCTGCCCGCC-GCGCGGATGTTGTGCACGT 752991 Query 222302 GCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCC 222361 |||| ||| || || ||||| ||| ||||| ||||| ||| || ||||| Sbjct 752992 GCAG----GCCAATGCCGCCGGCCGCTTTGCTGATCACCGCGCACTCCTTCAGGGTGTCG 753047 Query 222362 ATGATGCCCTCCATAGAGTCCTCCTT-GACGTTCAGCAGAAAACAAGACGACATCTGAGA 222420 |||||| || || ||| ||||| |||| || ||| || || || ||| || | Sbjct 753048 TAGATGCCGTCGATGCTGTCTTCCTTCGACG-CCACCAGGAAGCACGAGCTCATTTGCGG 753106 Query 222421 TTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACAT 222480 || | || | ||||||||| || || || ||||||| || ||| ||||| | ||||| Sbjct 753107 CTTCGGGGTGCCGGCGTTAAAGAGGGTCGGGGTGGCGTGGGTGAAGAAGCCCTTCGACAT 753166 Query 222481 CAGATCGTACGTCTCTACG-AC--TCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCA 222537 || ||||||||||| ||| || ||| | ||| | | |||||||| | ||| Sbjct 753167 GAGGTCGTACGTCTC-ACGCACGTTCTTGAGATCT--GCGCCGTGAATGCCGAGAGCGAC 753223 Query 222538 TCTCATGTACATGTACTGGGGCCTCTCCACA 222568 | |||| |||| | ||| || | ||||||| Sbjct 753224 ACGCATGAACATCTGCTGTGGACGCTCCACA 753254 Score = 95.1 bits (104), Expect = 2e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 221056 CTCGGTACGCATCTCGTCCGTCCATAGACCCCTCTCTTCCAGCACCTTGACCATGTGCTT 221115 |||| | |||||| || |||||||||| | | | || || |||| | || ||| Sbjct 751760 CTCGTTTCGCATCGACTCGTTCCATAGACCACGCGCGATGAGGTCCATGACGAGGTACTT 751819 Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 |||||| || |||| || || ||||| | | ||| | ||| || ||||| || Sbjct 751820 GTTCACAACAGGGAACTCGCCGCTCAGCACACGGCGGACGTAGATGTTCGAGGTGAAGGG 751879 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235 |||| || |||||||||||| || ||||| | ||| ||||| |||||||| || || Sbjct 751880 CTCGAAGCACTCGTTGTTGCCGAGAATCTGCGAGGTGGACGCGGTTGGCATGGGGGCAAC 751939 Query 221236 CAGCAGACTGTTGCGCA 221252 |||||| |||||||| Sbjct 751940 CAGCAGGGAGTTGCGCA 751956 >seq72 Length=122406 Score = 170 bits (188), Expect = 4e-37 Identities = 370/539 (69%), Gaps = 21/539 (4%) Strand=Plus/Plus Query 25512 CTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGT--ACGCTCTATCC 25569 |||||| | || ||||| || || | ||| |||||| | | |||| ||||| | | Sbjct 112395 CTGGACGGTGGAGGAGATCGACCTAGGCAACGACATGAAGGACTGGGCAACGCTGAA--C 112452 Query 25570 AAAGACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATA 25629 | | |||| ||| || ||||| | ||| | || ||||| || | | || || ||| Sbjct 112453 GACGGGGAGCGGCACTTCATCAAGCATGTGCTTGCCTTCTTCGCCGGCAGCGACGGCATA 112512 Query 25630 GTGAACGAGAATCTGTGCG-AGAGATTCACCAGGGAAGTGCAGTACGTG---GAGGC-CA 25684 || | ||||||||| |||| || | |||| || || ||| || ||| ||||| | Sbjct 112513 GTCATCGAGAATCT-TGCGCAGCGCTTCATGAGCGACGTGAAG---GTGCCAGAGGCGCG 112568 Query 25685 AGTGTTTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGC 25744 | ||| |||||| |||||| || || || || | ||||| ||| ||| | || Sbjct 112569 CGCGTT-CTACGGGTTCCAGCTGATGATGGAGAACATCCACTCGGAGACGTACTCTGTGC 112627 Query 25745 TTCTGATGACGTACATTACAGACGTCGCCGAGAGAGAT-CGGCTGTTTGGTGCCATCGAG 25803 | ||| |||||||| |||||| || |||| || | |||||| | || || || Sbjct 112628 TGCTGGACACGTACATCACAGACAGCGAGGAGA-AGCTGCGGCTGCTGCACGCGATACAG 112686 Query 25804 CACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGC 25863 || || ||||| ||| ||||||| ||||||| || ||||||| ||| ||| Sbjct 112687 ACGATCCCGTGCATCCAGAAGAAGGCGGAGTGGGCCGTGCGGTGGATCGGGAGC---AGC 112743 Query 25864 GCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGT 25923 || | ||| ||||||||| | | |||||| || ||||||||||| || || ||| Sbjct 112744 GCGAGCTTTCAGGAGCGGCTGATCGGCTTTGCCGCGGTGGAGGGCATTTTCTTTTCCGGG 112803 Query 25924 TCGTT-TGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTC 25982 ||||| ||| || | |||||||| ||| || || ||||| |||||| || Sbjct 112804 TCGTTCTGC-GCGCTGTTCTGGCTGAAGAAGCGCGGTCTGATGCCAGGGCTGACGTTCAG 112862 Query 25983 CAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACA 26041 ||||||||||||| | ||||||||||| |||| || || || |||||||| |||| Sbjct 112863 CAACGAGCTCATCTCGCGCGACGAGGGTCTACACACGGACTTCGCATGCCTGCTGTACA 112921 >seq33 Length=364854 Score = 170 bits (188), Expect = 4e-37 Identities = 370/539 (69%), Gaps = 21/539 (4%) Strand=Plus/Minus Query 25512 CTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGT--ACGCTCTATCC 25569 |||||| | || ||||| || |||| ||| |||||| | | |||| ||||| | | Sbjct 190944 CTGGACGGTGGAGGAGATCGACCTGGGCAACGACATGAAGGACTGGGCAACGCTGAA--C 190887 Query 25570 AAAGACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATA 25629 | | |||| ||| || ||||| | ||| | || ||||| || | | || || ||| Sbjct 190886 GACGGGGAGCGGCACTTCATCAAGCATGTGCTTGCCTTCTTCGCCGGCAGCGACGGCATA 190827 Query 25630 GTGAACGAGAATCTGTGCG-AGAGATTCACCAGGGAAGTGCAGTACGTG---GAGGC-CA 25684 || | ||||||||| |||| || | |||| || || ||| || ||| ||||| | Sbjct 190826 GTCATCGAGAATCT-TGCGCAGCGCTTCATGAGCGACGTGAAG---GTGCCAGAGGCGCG 190771 Query 25685 AGTGTTTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGC 25744 | ||| |||||| |||||| || || || || | ||||| ||| ||| | || Sbjct 190770 CGCGTT-CTACGGGTTCCAGCTGATGATGGAGAACATCCACTCGGAGACGTACTCTGTGC 190712 Query 25745 TTCTGATGACGTACATTACAGACGTCGCCGAGAGAGAT-CGGCTGTTTGGTGCCATCGAG 25803 | ||| |||||||| || ||| || |||| || | |||||| | || || || Sbjct 190711 TGCTGGACACGTACATCACGGACAGCGAGGAGA-AGCTGCGGCTGCTGCACGCGATACAG 190653 Query 25804 CACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGC 25863 || || ||||| ||| ||||||| ||||||| || ||||||| ||| ||| Sbjct 190652 ACGATCCCGTGCATCCAGAAGAAGGCGGAGTGGGCCGTGCGGTGGATCGGGAGC---AGC 190596 Query 25864 GCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGT 25923 || | ||| ||||||||| | | |||||| || ||||||||||| || || ||| Sbjct 190595 GCGAGCTTTCAGGAGCGGCTGATCGGCTTTGCCGCGGTGGAGGGCATTTTCTTTTCCGGG 190536 Query 25924 TCGTT-TGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTC 25982 ||||| |||| | | |||||||| ||| || || ||||| |||||| || Sbjct 190535 TCGTTCTGCGCGC-TGTTCTGGCTGAAGAAGCGCGGTCTGATGCCAGGGCTGACGTTCAG 190477 Query 25983 CAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACA 26041 ||||||||||||| | ||||||||||| |||| || || || |||||||| |||| Sbjct 190476 CAACGAGCTCATCTCGCGCGACGAGGGTCTACACACGGACTTCGCATGCCTGCTGTACA 190418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928840898851840