Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq2 98.7 1e-15 >seq2 Length=1084633 Score = 98.7 bits (108), Expect = 1e-15 Identities = 545/861 (63%), Gaps = 11/861 (1%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 |||||| | ||||||||||| ||||| ||||||| ||||| | ||| | | || Sbjct 753244 CCACAGCAGATGTTCATGCGTGTCGCTCTCGGCATTCACGGCGCAGATCTCAAGAACGTG 753185 Query 75272 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 75331 ||||| |||||| ||||| | || | |||| ||||| || || |||||||| Sbjct 753184 CGTGAGACGTACGACCTCATGTCGAAGGGCTTCTTCACCCACGCCACCCCGACCCTCTTT 753125 Query 75332 AATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 75391 || || || || || | ||||| ||| | |||||||| | || ||||| ||| Sbjct 753124 AACGCCGGCACCCCGAAGCCGCAAATGAGCTCGTGCTTCCTGGTGGCGTCGAAGGAAGAC 753065 Query 75392 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATC-TCAAAGTGGGCTGG 75450 ||| |||| ||||| | || || | |||||| ||| ||| ||||| ||| || Sbjct 753064 AGCATCGACGGCATCTACGACACCCTGAAGGAGTGCGCGGTGATCAGCAAAG-CGGCCGG 753006 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGC-CAATAAATCTCGTATTCGGGGGACAA 75509 || ||||| ||||| | || | | | || | || || || || | Sbjct 753005 CGGCATTGGCCTGCACGTGCACAACATCCGCGCGGCGGGCAGCT-ACATAGCTGGTACGA 752947 Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569 | || || | || | | |||||||| ||||| || ||| ||| || ||||| | Sbjct 752946 ACGGCACGTCGAACGGGCTCGTGCCAATGCTACGCGTCTTCAACAACACCGCCCGCTACG 752887 Query 75570 TAAATCAAGCGGGGCGT---CGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATG 75626 | | || | || || |||||||| || | || ||||| | || || ||||| | Sbjct 752886 TGGACCAGGGTGGCGGTAAGCGCAAGGGCGCCTTTGCCGTCTATCTCGAGCCCTGGCACG 752827 Query 75627 CCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTA 75686 |||| || | | || || | | || |||| || | || || || Sbjct 752826 CCGACGTCTTTGGCTTTCTGCTGCTGAAACGCAACACGGGAAAAGATGACCAGCGCGCCC 752767 Query 75687 GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTG 75746 | || ||||| | | |||||||| ||||| || || |||| ||| | ||| || | | Sbjct 752766 GCGACCTCTTCTATGCGCTGTGGATCCCAGATCTGTTTATGAGGCGTG-TGAAAAGCGAG 752708 Query 75747 GTCAA-TGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGA-CGCGGTGGGTGA 75804 | || ||| | || | ||| ||| | || || ||| ||| || | ||||| Sbjct 752707 GGGAAGTGGACGCTGATGGATCCCAACACGTGCCCGGGCCTCAGCGATTGCTAT-GGTGA 752649 Query 75805 GGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACC 75864 ||||||||| |||||| || || ||||| | | | ||| | | Sbjct 752648 GGAGTTTGAGCGGCTCTACGAGCGCTACGAGTCCGAGGGCCGCGGCGTCAAGACGATCCA 752589 Query 75865 AGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATAT 75924 ||| || || ||| || || || | || |||| ||||| || || | || Sbjct 752588 GGCCCAGGAGGTGTGGTTTGCCATCCTGGAGTCGCAGATCGAGACGGGCGGGCCGTTCAT 752529 Query 75925 GCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAG 75984 || |||||||| || || |||| ||| ||||| |||||| | || || |||||| | Sbjct 752528 CCTCTACAAGGACGCATGCAACAGCAAGTCGAACCAGAAGAATCTTGGCACGATCAAGTG 752469 Query 75985 CTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAA 76044 ||| || || |||||||| ||| | |||||||| | | |||||||| || ||||| Sbjct 752468 CTCGAACCTATGCACGGAGATTGTCGAGTACACGTCGCCGCAGGAGACGGCGGTGTGCAA 752409 Query 76045 TTTGGCATCAATCGCCCTTCC 76065 | || || ||||| || || Sbjct 752408 CCTCGCCTCCATCGCGCTGCC 752388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596567094407680