Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq11 179 5e-40 seq85 141 1e-28 >seq11 Length=544400 Score = 179 bits (198), Expect = 5e-40 Identities = 459/693 (66%), Gaps = 8/693 (1%) Strand=Plus/Minus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 || || || ||||| | || || || ||||| || || || || | | || || | Sbjct 131594 GCCATCGGCATCGACCTGGGCACGACGTACTCGTGCGTCGGCGTCTTCAAGAACGAGCAG 131535 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || || || || | || ||||| || ||||| ||||| || || || || ||||| || Sbjct 131534 GTGGACATCATTGCCAACGACCAGGGTAACCGCACAACGCCGTCTTATGTGGCCTTCACC 131475 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 || | || || || | || |||||||| || || ||| || |||||||| | ||| Sbjct 131474 GAGACAGAGCGCCTGATCGGCGATGCCGCCAAGAACCAGGTGGCCATGAACCCGAGCAAC 131415 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || || |||||||||||||| | || || |||||||| ||| | | || Sbjct 131414 ACCGTGTTTGACGCGAAGCGCATGATCGGCCGCAAGTTCGACGATCCCGACCTTCAGTCG 131355 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAAT 195598 || || ||| ||||| | | | ||| || || | || | ||||| | || | Sbjct 131354 GACATGAAGCACTGGCCCT-TCAAGGTGGTC--GTCAAGGACGGCAAGCCGGTCATCAGC 131298 Query 195599 GTTGAATTTCACGGTGAGAAGAA-ACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTT 195657 || || | || ||| || || ||| | || || || || ||| |||||||| | Sbjct 131297 GTCGAGTACCAGAACCAGACCAAGACCTTTTTC-CCAGAGGAGATCTCGGCTATGGTGCT 131239 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717 | |||||||||||||| ||||| | | | |||| || ||||| | || || || Sbjct 131238 GCAGAAGATGAAGGAGACGGCGGAGGCGTACCTGGGCAAGCAGGTGAAGAAGGCCGTGGT 131179 Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777 ||| || || || ||||||| || || || || ||||| || |||||||| | | || Sbjct 131178 GACGGTGCCGGCGTACTTCAACGACTCGCAGCGCCAGGCAACGAAGGACGCCGGCTCCAT 131119 Query 195778 TGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGG 195837 || || || ||| || | || ||||| || || || || || || || || || || Sbjct 131118 CGCTGGCCTCAACGTGCTGCGCATCATCAACGAGCCGACGGCAGCGGCCATCGCGTACGG 131059 Query 195838 TCTGGACAAGAACAAGGACG---AAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGG 195894 ||||||||| | | |||| | || || || ||||||| || || || || || Sbjct 131058 CCTGGACAAGGGCGACGACGGCAAGGAGCGCAACGTGCTGATCTTCGACCTTGGCGGCGG 130999 Query 195895 TACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGC 195954 ||||| ||||| | || || | || || || | ||||| |||||||| || || Sbjct 130998 CACGTTCGATGTGACGCTGCTGACGATCGAGTCCGGCGTGTTCGAGGTAAAGGCAACCGC 130939 Query 195955 TGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||| || || || || || || || ||||| Sbjct 130938 GGGTGACACGCACCTTGGCGGCGAGGACTTCGA 130906 >seq85 Length=76128 Score = 141 bits (156), Expect = 1e-28 Identities = 297/440 (68%), Gaps = 2/440 (0%) Strand=Plus/Minus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 || || || ||||| | || || || ||||| || || || || ||||| || || || Sbjct 445 GCCATCGGCATCGACCTGGGCACGACGTACTCGTGCGTGGGCGTGTGGCAGAACGAACGC 386 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || || || ||| |||| ||||| || ||||| || || || ||||||||||| || || Sbjct 385 GTGGATATCATCGCGAACGACCAGGGTAACCGCACGACACCGTCGTACGTTGCGTTCACG 326 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 || || || || | || ||||||||||| || ||| || |||||||| ||| Sbjct 325 GACTCGGAGCGGCTGATCGGCGATGCCGCAAAGAACCAGGTGGCAATGAACCCGCACAAC 266 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || || || ||||||||||| || ||||| |||||||| || | || || Sbjct 265 ACGGTGTTCGACGCGAAGCGCCTGATTGGCCGCAAGTTCAACGACTCGGTTGTGCAGTCG 206 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTG-GCTGATAAGCCTATGATTAA 195597 || || ||| ||||| | | | ||| || || | | | || ||||| ||||| Sbjct 205 GACATGAAGCACTGGCCGT-TCAAGGTGACGACGAAGGGCGACGACAAGCCCGTGATTTC 147 Query 195598 TGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTT 195657 || | | | ||| ||| |||| || | || || || || || |||||| | Sbjct 146 GGTGCAGTACCGCGGCGAGGAGAAGACCTTCACGCCGGAGGAGATCAGCTCGATGGTGCT 87 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717 | | |||||||||||||| ||||| | | | |||| || ||||| | || || || Sbjct 86 GCTGAAGATGAAGGAGACGGCGGAGGCGTACCTGGGCAAGCAGGTGAAGAAGGCCGTGGT 27 Query 195718 GACTGTACCTGCTTACTTCA 195737 ||| || || || ||||||| Sbjct 26 GACGGTGCCGGCGTACTTCA 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657859636977920