Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq2 111 5e-19 >seq2 Length=1084633 Score = 111 bits (122), Expect = 5e-19 Identities = 615/971 (63%), Gaps = 36/971 (4%) Strand=Plus/Plus Query 155589 ATAGACGCCAGATTACATACCGCAGTCTCCTT-GTCGTCGCTGTATTCTACAATCTCACA 155647 || || || || || || ||||| ||||||| | || || |||| || |||||||| Sbjct 752397 ATGGAGGCGAGGTTGCACACCGCCGTCTCCTGCGGCGACG-TGTACTCGACAATCTCCGT 752455 Query 155648 GCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGC 155707 ||| ||||| || | |||||| ||||| | |||||||||||| || || ||||| || || Sbjct 752456 GCATAGGTTCGAGCACTTGATCGTGCCAAGATTCTTCTGGTTCGACTTGCTGTTGCATGC 752515 Query 155708 ATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCA 155767 |||||||| || ||| | || || ||||| ||||| | ||||| || | ||| Sbjct 752516 GTCCTTGTAGAGGATGAACGGCCCGCCCGTCTCGATCTGCGACTCCAGGATGGCAAACCA 752575 Query 155768 GAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATATACAG 155827 | || |||| | || |||| | | ||| || ||||| || | || || Sbjct 752576 CACCTCCTGGGCCTGGATCGTCTTGACGCCGCGGCCCTCGGACTCGTAGCGCTCGTAGAG 752635 Query 155828 -CGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAACA 155886 || || | |||||||| || ||||| || || || |||||| | | ||| | || Sbjct 752636 CCGCTC-AAACTCCTCACCATAGCAATCGCTGAGGCCCGGGCACGTGTTGGGATCCATCA 752694 Query 155887 GCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAGCAT 155946 ||| ||| | | | | |||||| |||||| | ||| ||| | |||| Sbjct 752695 GCGTCCACTTCCCCTCGCTTTTCACACGCCTCATAAACAGATCTGGGATCCACAGCGCAT 752754 Query 155947 AGAAAAGGTCCCTTGC-CTTTGACTCCTC-ATCGCCGTGATTC--TTCCGTAGCTCTAAG 156002 |||| ||||| | || | || || || | ||||| | | ||| | ||| || Sbjct 752755 AGAAGAGGTCGCGGGCGCGCTG-GTCATCTTTTCCCGTGTTGCGTTTCAGCAGC----AG 752809 Query 156003 AATTCCTCA-ATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTT 156061 || || | | || | || ||||| ||||| | ||||| || || | ||| Sbjct 752810 AAAGCCAAAGACGTCGGCGTGCCAGGGCTCGAGATAGACGGCAAAGGCGCCCTTGCGCTT 752869 Query 156062 ---GCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAAT 156118 ||||||||| || || || || || || || |||||||| | |||||| || | | Sbjct 752870 ACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTGTTGAAGACGCGTAGCATTGGCACGAG 752929 Query 156119 ACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAAT 156178 || || || ||||| || || || || | || | | ||| | || || | Sbjct 752930 CCCGTTCGACGTGCCGTTCGTACCAGCTATGTAGCTGCCCGCCGCGCGGATGTTGTGCAC 752989 Query 156179 ATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAA 156238 || || ||||| || || | | ||| || ||||| ||||| | || | | | Sbjct 752990 GTGCAGGCCAATGCCGCCGGCCGCTTTGCTGATCACCGCGCACTCCTTCAGGGTGTCGTA 753049 Query 156239 AATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGG--T 156296 || || || || || || | | | | || ||||||| || | ||| || | Sbjct 753050 GATGCCGTCGATGCTGTCTTCCTTCGACGCCACCAGGAAGCACGAGCTCATTTGCGGCTT 753109 Query 156297 CGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATA 156356 || |||| || ||||| || || || || || || || | || | || ||||| Sbjct 753110 CGGGGTG--CCGGCGTTAAAGAGGGTCGGGGTGGCGTGGGTGAAGAAGCCCTTCGACATG 753167 Query 156357 TAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTC 156416 ||||| ||||| | |||| |||| | |||||||| | || || ||| | | Sbjct 753168 AGGTCGTACGTCTCACGCACGTTCTTGAGATCTGCGCCGTGAATGCCGAGAGCGACACGC 753227 Query 156417 ATCCACATATGCTGAGGACGCTCTACAA--------TCACTCC-------ATCAATTCGC 156461 || |||| ||||| |||||||| |||| |||| || || || ||| Sbjct 753228 ATGAACATCTGCTGTGGACGCTCCACAATTCGCATCTCACCCCTTCCGGTCTCGATACGC 753287 Query 156462 AGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGTTG 156521 || ||||| | ||| ||||| || || ||||||| | || || || || ||| | Sbjct 753288 AGCAGGTACGAGCGCTCCAGCGTCTTGTACCCGAAGAACTCGAAGTTCAAGTCGCGGGAG 753347 Query 156522 TAATCAATCAT 156532 || || ||||| Sbjct 753348 TAGTCGATCAT 753358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471811263825232