Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq60 145 2e-30 >seq60 Length=166142 Score = 145 bits (160), Expect = 2e-30 Identities = 243/348 (70%), Gaps = 10/348 (3%) Strand=Plus/Plus Query 37172 TTACCCGCAAAGGTGCTGTTCGGGCCCGCGAGGGCGACCTGGGCATCATCCCTGGCTCGA 37231 |||| ||||| |||||| | || || ||| || || | | | || || || || | Sbjct 94281 TTACTCGCAAGGGTGCTACTTCTGCGCGTATGGGTGAGCTCGCCGTGATTCCGGGGTCCA 94340 Query 37232 TGGGTGC--GAAGTCATTCATCGTTCGCGGCAAGGGAAATTCCGAATCGTTCTGCTCTTG 37289 |||| || | || | ||||||||| |||||||||| | ||| | | |||||| || Sbjct 94341 TGGGGGCCTGCAGCTA--CATCGTTCGAGGCAAGGGAAGTGCCGCAAGCTACTGCTCCTG 94398 Query 37290 CAGCCACGGTGCCGGTCGAATGATGAGCCGGGCCGAAGCAAAACGCCGGTTCACAGTCGA 37349 | ||||||||||| || ||||| | ||| || || || ||||| || | Sbjct 94399 CTCGCACGGTGCCGGGCGCCGCTACAGCCGCGGCGAGGCGCGCCGGCGATTCACTGTGGC 94458 Query 37350 GGATCATGAGGCGGCCACCAAAGGTATCGAGTGCCGCAAAGATGCCGAAGTGATCGACGA 37409 ||||||||||| ||||| || |||||||||||||| || | ||| | ||||| Sbjct 94459 AGATCATGAGGCTGCCACACTGGGCATCGAGTGCCGCAAGGACAGCAGCGTGTTGGACGA 94518 Query 37410 GACGCCAGCGGCTTACAAGGACATCGATGCGGTCATGGCCGCGCAATCCGCCCTGGTGGA 37469 ||| || || ||||||||| ||||||||| |||||||| || || || |||||| || Sbjct 94519 GACACCTGCCGCTTACAAGAGCATCGATGCTGTCATGGCTGCTCAGGACGACCTGGTCGA 94578 Query 37470 CATCGTGCACACG---CTGCGCCAAGTCGTTTGCGTGAAGGGTTGAGG 37514 |||| |||| |||| |||||| | || ||||| || ||||| Sbjct 94579 GGTCGT---CACGGTATTGCGGCAAGTCCTATGTGTGAAAGGGTGAGG 94623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139282644260032