Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq12 100 2e-16 seq4 93.3 3e-14 seq14 91.5 1e-13 >seq12 Length=572832 Score = 100 bits (110), Expect = 2e-16 Identities = 158/223 (71%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||| || || ||| ||| || || |||||||| || ||||| ||||| | || || Sbjct 485349 CACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCCTCCTC 485290 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 || || || ||||| || |||| |||||||| || |||| | || || ||||| Sbjct 485289 CAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 485230 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 || || |||| ||| || | |||||||| | ||||| || | || |||||| | Sbjct 485229 GATCTTGGCCTTCA-CATTCTCGATCGTGTCGCTCGGCTCCACCTCCAGCGCGATCGTCT 485171 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCATAGT--TGGTGTG 33759 | || || | ||| || || ||||||||||| || ||||||| Sbjct 485170 TGCCGGTCAGCGTCTTCACGAAGATCTGCATGGTGGTGGTGTG 485128 >seq4 Length=1102922 Score = 93.3 bits (102), Expect = 3e-14 Identities = 156/222 (70%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||| || || ||| ||| || || |||||||| || ||||| ||||| | || || Sbjct 384298 CACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCCTCCTC 384357 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 || || || ||||| || |||| |||||||| || |||| | || || ||||| Sbjct 384358 CAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 384417 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 || || |||| | | || | |||||||| | ||||| || | || |||||| | Sbjct 384418 GATCTTGGCCTTCA-CGTTCTCGATCGTGTCGCTCGGCTCCACCTCCAGCGCGATCGTCT 384476 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCATAGTTGGTGTGT 33760 | || || | ||| || || ||||||||||| | ||||| || Sbjct 384477 TGCCGGTCAGCGTCTTCACGAAGATCTGCATTG-TGGTGGGT 384517 >seq14 Length=517377 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||| || || ||| ||| || || |||||||| || ||||| ||||| | || || Sbjct 230906 CACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCCTCCTC 230847 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 || || || ||||| || |||| |||||||| || |||| | || || ||||| Sbjct 230846 CAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 230787 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 || || |||| | | || | |||||||| | ||||| || | || |||||| | Sbjct 230786 GATCTTGGCCTTCA-CGTTCTCGATCGTGTCGCTCGGCTCCACCTCCAGCGCGATCGTCT 230728 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752 | || || | ||| || || ||||||||||| || Sbjct 230727 TGCCGGTCAGCGTCTTCACGAAGATCTGCATGGT 230694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328702653957120