Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq2 320 2e-82 seq33 107 2e-18 seq72 104 2e-17 >seq2 Length=1084633 Score = 320 bits (354), Expect = 2e-82 Identities = 605/870 (70%), Gaps = 29/870 (3%) Strand=Plus/Plus Query 147460 GCGATAGACGCCAGATTGCAGACGGCCGTCTCTT-CGGCGTCGCTGTACTGCACGATTTC 147518 ||||| || || || ||||| || |||||||| | ||||| || |||||| || || || Sbjct 752394 GCGATGGAGGCGAGGTTGCACACCGCCGTCTCCTGCGGCGACG-TGTACTCGACAATCTC 752452 Query 147519 GGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCA 147578 | ||| ||||| ||| || || || | ||| | ||| || || | ||||| Sbjct 752453 CGTGCATAGGTTCGAGCACTTGATCGTGCCAAGATTCTTCTGGTTCGACTTGCTGTTGCA 752512 Query 147579 CGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAA 147635 ||||| ||| |||| ||| |||| ||||| ||||||| |||| || | ||| ||| Sbjct 752513 TGCGTCCTTGTAGAGGATGAACGGCCCGCCCGTCTCGATCTGCGACTCCAGGATGGCAAA 752572 Query 147636 CCTATGCAGGTCCTGCGCTCGCACCCGCT-GCCGATAGCGGCCCTCGTTTTCGTACCGCT 147694 || || ||||| || | | | || | || |||||||||| ||||| |||| Sbjct 752573 CCA---CACCTCCTGGGCCTGGATCGTCTTGACGCC-GCGGCCCTCGGACTCGTAGCGCT 752628 Query 147695 CGTACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACAC-TGATGCGGA 147753 |||| | |||||||||||| || || ||||||||| ||||| || ||| || || ||| Sbjct 752629 CGTAGAGCCGCTCAAACTCCTCACCATAGCAATCGCTGAGGCCCGGGCACGTGTTG-GGA 752687 Query 147754 CACATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCAC 147813 |||||||| |||| | | || || || || | |||||||||||| || | |||| Sbjct 752688 TCCATCAGCGTCCACTTCCCCTCGCTTTTCACACGCCTCATAAACAGATCTGGGATCCAC 752747 Query 147814 AGCGCGTACATAAGATCGC--GCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAAT 147871 ||||| || | || |||| |||| || || || ||| |||||||||||| Sbjct 752748 AGCGCATAGAAGAGGTCGCGGGCGCGCTG--GTCATCTTTTCCCGTGTTGCGTTTCAGCA 752805 Query 147872 TAAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTAC 147931 || | || | ||| ||||||||||||||| || | |||||||| | || || || | Sbjct 752806 GCAGAAAGCCAAAGACGTCGGCGTGCCAGGGCTCGAGATAGACGGCAAAGGCGCCCTTGC 752865 Query 147932 GCTTTCCG---CCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTT 147988 |||| ||| |||||||| || | ||| | ||||||| || ||||| | ||| || Sbjct 752866 GCTTACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTGTTGAAGACGCGTAGCATTGGCA 752925 Query 147989 CCAGGCCGCTCGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGT 148048 | || ||| ||| |||||||| || | || | |||||| || || | | || Sbjct 752926 CGAGCCCGTTCGACGTGCCGTTCGTACCAGCTATGTAGCTGCCCGCCGCGCGGATGTTGT 752985 Query 148049 GCACGTTAACGCCAATGCCGCC-GCCGTACTTTGAT-ATGGCAGCGCAATCGCCCAATGT 148106 |||||| | |||||||||||| |||| ||||| | || | ||||| || || || Sbjct 752986 GCACGTGCAGGCCAATGCCGCCGGCCG--CTTTGCTGATCACCGCGCACTCCTTCAGGGT 753043 Query 148107 CGTGTAGATGCCGTCGATGCTGTCGT-TTTTGACGCCAAGCAAAAAACACGAACACATTT 148165 ||||||||||||||||||||| | || |||||| | || || ||||| | ||||| Sbjct 753044 GTCGTAGATGCCGTCGATGCTGTCTTCCTTCGACGCC-ACCAGGAAGCACGAGCTCATTT 753102 Query 148166 GCGGAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAA--TTTTTG 148223 |||| || | || || || || ||||| || | ||||| || || || || | Sbjct 753103 GCGGCTTCGGGGTGCCGGCGTTAAAGAGGGTCGGGGTGGCGTGGGTGAAGAAGCCCTTCG 753162 Query 148224 ACTCATCATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGC 148283 | ||| | | ||||||||| ||| | || || ||||||||||||| || || Sbjct 753163 A--CATGAGGTCGTACGTCTCACGCACGTTCTTGAGATCTGCGCCGTGAATGCCGAGAGC 753220 Query 148284 GACGCGCATGAGCATGTGCTGTGGTCGTTC 148313 ||| ||||||| ||| |||||||| || || Sbjct 753221 GACACGCATGAACATCTGCTGTGGACGCTC 753250 >seq33 Length=364854 Score = 107 bits (118), Expect = 2e-18 Identities = 239/347 (69%), Gaps = 14/347 (4%) Strand=Plus/Minus Query 46914 ATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCGCGACGAAGGACTACACACGGAC 46973 ||||| || ||||||||||| |||||| | |||||||||||||| || |||||||||||| Sbjct 190496 ATGCCAGGGCTGACGTTCAGCAACGAGCTCATCTCGCGCGACGAGGGTCTACACACGGAC 190437 Query 46974 TTTGCGTGTCTCTATTACAAGACGCGCGTGAATGAGAA-ATTAAACTCGGACACGATCCT 47032 || || || || ||||| ||| | | || | || | | || | || | || Sbjct 190436 TTCGCATGCCTGCTGTACAACTCGCACATCAAGCACAAGCTGCCGCGCGAGCGCG-TGCT 190378 Query 47033 GAGCATGTTTAGGGAGGCGGTGAGCATCGAAAAGGAGTTTTTTACTGCG--GCGCTGCCC 47090 | || | ||| ||||||| |||||| ||||| | ||||| |||||||| Sbjct 190377 GGAGATTATCGTGGATGCGGTGAACATCGAGCGCGAGTTCAT--CTGCGACGCGCTGCCG 190320 Query 47091 GT-CGCCTTGCTGGGCATGAACGCACAGTCTATGTGCG-AATATATTGAGTTTGTGGCGG 47148 || || | || | ||||||||||| || ||| ||| | || || ||||| || |||| Sbjct 190319 GTGCGGC-TGATTGGCATGAACGCGGAGCTGATG-GCGCAGTACATCGAGTTCGTCGCGG 190262 Query 47149 ATCGTCTGTTGGTGCAGCTCGGACAACCGAAATATTTTAATGCTCG--TAATCCGTTTGA 47206 | || ||| ||||| |||||| | ||| | || |||| | ||||| || Sbjct 190261 ACCGGCTGCTGGTGTCGCTCGGCGAGGAGAAGCA--CTACCACTCGACGCAGCCGTTCGA 190204 Query 47207 GTTTATGAACAACATTTCGCTCGAGGGCAAAACCAATTTTTTCGAGA 47253 || ||| | | || ||||| |||||||||| || || ||||||| Sbjct 190203 ATTCATGGAGATGATCTCGCTGCAGGGCAAAACAAACTTCTTCGAGA 190157 >seq72 Length=122406 Score = 104 bits (114), Expect = 2e-17 Identities = 248/363 (68%), Gaps = 14/363 (4%) Strand=Plus/Plus Query 46914 ATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCGCGACGAAGGACTACACACGGAC 46973 ||||| || ||||||||||| |||||| | |||||||||||||| || |||||||||||| Sbjct 112843 ATGCCAGGGCTGACGTTCAGCAACGAGCTCATCTCGCGCGACGAGGGTCTACACACGGAC 112902 Query 46974 TTTGCGTGTCTCTATTACAAGACGCGCGTGAATGAGAA-ATTAAACTCGGACACGATCCT 47032 || || || || ||||| ||| | | || | || | | || | || | || Sbjct 112903 TTCGCATGCCTGCTGTACAACTCGCACATCAAGCACAAGCTGCCGCGCGAGCGCG-TGCT 112961 Query 47033 GAGCATGTTTAGGGAGGCGGTGAGCATCGAAAAGGAGTTTTTTACTGCG--GCGCTGCCC 47090 | || | ||| ||||||| |||||| ||||| | ||||| |||||||| Sbjct 112962 GGAGATTATCGTGGATGCGGTGAACATCGAGCGCGAGTTCAT--CTGCGACGCGCTGCCG 113019 Query 47091 GT-CGCCTTGCTGGGCATGAACGCACAGTCTATGTGCG-AATATATTGAGTTTGTGGCGG 47148 || || | || | ||||||||||| || ||| ||| | || || ||||| || |||| Sbjct 113020 GTGCGGC-TGATTGGCATGAACGCGGAGCTGATG-GCGCAGTACATCGAGTTCGTCGCGG 113077 Query 47149 ATCGTCTGTTGGTGCAGCTCGGACAACCGAAATATTTTAATGCTCG--TAATCCGTTTGA 47206 | || ||| ||||| |||||| | ||| | || |||| | || || || Sbjct 113078 ACCGGCTGCTGGTGTCGCTCGGCGAGGAGAAGCA--CTACCACTCGACGCAGCCATTCGA 113135 Query 47207 GTTTATGAACAACATTTCGCTCGAGGGCAAAACCAATTTTTTCGAGAAACGAGTCGGAGA 47266 || ||| | | || || || |||||||||| || || |||||||| | || || || Sbjct 113136 CTTCATGGAGATGATCTCTCTGCAGGGCAAAACGAACTTCTTCGAGAAGAGGGTGGGGGA 113195 Query 47267 GTA 47269 ||| Sbjct 113196 GTA 113198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476609198232960