Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 1e-14 >seq2 Length=1084633 Score = 96.9 bits (106), Expect = 1e-14 Identities = 289/436 (66%), Gaps = 10/436 (2%) Strand=Plus/Minus Query 254834 GAAGACAGTATCCAAGGCATCTTCGAAACGCTATCGCGATGCGCATTCGTGAGTCAATCG 254893 |||||||| ||| | ||||||| ||| || || | ||||| | | || || || Sbjct 753070 GAAGACAGCATCGACGGCATCTACGACACCCTGAAGGAGTGCGCGGTGATCAGCAAAGCG 753011 Query 254894 AGCGGCGGCGTGGGACTCAACATCTCCAACGTGCGCGCCAGCGGCACACCGAT-TCGCTC 254952 ||||||| | || || || | |||| | ||||| |||| || | | | ||| Sbjct 753010 GCCGGCGGCATTGGCCTGCACGTGCACAACATCCGCGCG-GCGGG-CAGCTACATAGCTG 752953 Query 254953 G-ACGAACGG-ACG--GAGCGGCGGCATTATACCAATGATCCGTGTGTTCAACAACGTGG 255008 | |||||||| ||| || ||| || | | |||||| | || || ||||||||| | Sbjct 752952 GTACGAACGGCACGTCGAACGG--GC-TCGTGCCAATGCTACGCGTCTTCAACAACACCG 752896 Query 255009 CTCGCTACGTCGATCAAGGGGGCGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGC 255068 | |||||||| || || || ||||| || ||| || || || || |||| || |||| Sbjct 752895 CCCGCTACGTGGACCAGGGTGGCGGTAAGCGCAAGGGCGCCTTTGCCGTCTATCTCGAGC 752836 Query 255069 CGTGGCACGCCGACATTGAACGGTTTTTACTGCTGTCCGACAAGACCGGCACCGAGGAGC 255128 | |||||||||||| | | ||| | |||||| ||| || || | || || | Sbjct 752835 CCTGGCACGCCGACGTCTTTGGCTTTCTGCTGCTGAAACGCAACACGGGAAAAGATGACC 752776 Query 255129 TGATCGCCCGCGACATCTACACCGCTGTCTGGTGCTGCGATCTGTTTATGCGACGCGTGG 255188 | |||||||||| ||| | || | ||| | |||||||||||| | || ||| Sbjct 752775 AGCGCGCCCGCGACCTCTTCTATGCGCTGTGGATCCCAGATCTGTTTATGAGGCGTGTGA 752716 Query 255189 AACGAGACGAGACCTGGAGCCTCATGTGTCCCAACTTATCGCCCGGTCTAGTCGACTCTT 255248 || | || | || |||| || ||| ||||||| | || || || ||| | | Sbjct 752715 AAAGCGAGGGGAAGTGGACGCTGATGGATCCCAACACGTGCCCGGGCCTCAGCGATTGCT 752656 Query 255249 GGGGTGACGAGTTTGA 255264 ||||| |||||||| Sbjct 752655 ATGGTGAGGAGTTTGA 752640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588329162213520