Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq72 123 3e-23 seq33 114 2e-20 >seq72 Length=122406 Score = 123 bits (136), Expect = 3e-23 Identities = 350/531 (66%), Gaps = 20/531 (4%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || ||||| |||| ||||||||||||||| || || || | || ||| ||||||| Sbjct 113198 TACTCCCCCACCCTCTTCTCGAAGAAGTTCGTTTTGCCCTGCAGAGAGATCATCTCCATG 113139 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAATTGCTGGCACTC--CAATCTGTTTGAGGAGAC 129845 || || ||||| | | | |||| | |||| ||| | | | || || | Sbjct 113138 AAGTCGAATGGCTGCGTCGAGTGGTAG--TGCTTCTCCTCGCCGAGCGACACCAGCAGCC 113081 Query 129846 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTAC 129905 | |||| |||| |||| ||||||| | |||| ||| | |||||| || || || Sbjct 113080 GGTCCGCGACGAACTCGATGTACTGCGCCATCAGCTCCGCGTTCATGCCAATCAGCCGCA 113021 Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965 || |||||||| |||||||| | ||| |||| ||| || ||| | || | Sbjct 113020 CCGGCAGCGCGTCGCAGATGAACTCGCGCTCGATGTTCACCGCATCCACGATAATCTCCA 112961 Query 129966 GAATGGTCTC-CGTGCCAGGTCTATTGCGCAAAGTC----TTGAAGAGTTCCACG---GC 130017 | | | ||| || | ||| || ||| | || ||| | || || | || Sbjct 112960 GCACGCGCTCGCGCGGCAG--CTTGTGCTTGATGTGCGAGTTGTACAG---CAGGCATGC 112906 Query 130018 AAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGG 130077 || ||| ||| ||||||||||| || |||||||| || || ||| ||| ||||| Sbjct 112905 GAAGTCCGTGTGTAGACCCTCGTCGCGCGAGATGAGCTCGTTGCTGAACGTCAGCCCTGG 112846 Query 130078 CATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCC 130137 ||| ||||| |||||||||| |||||| | ||| || || || || || ||||| || || Sbjct 112845 CATCAGACCGCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCCGGAAAAGAAAATGCC 112786 Query 130138 CTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCA 130197 |||||| || || | | || ||||| || ||| | | | | | ||| Sbjct 112785 CTCCACCGCGGCAAAGCCGATCAGCCGCTCCTGAA---AGCTCGCGCTGCTCCCGATCCA 112729 Query 130198 CTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 130248 | || ||||||| |||||| |||| ||| ||||||| ||||| ||||| Sbjct 112728 CCGCACGGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGTATCGC 112678 >seq33 Length=364854 Score = 114 bits (126), Expect = 2e-20 Identities = 348/531 (66%), Gaps = 20/531 (4%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || ||||| ||| | |||||||||||||||| || || | || ||| ||||||| Sbjct 190141 TACTCCCCCACCTTCCTCTCGAAGAAGTTTGTTTTGCCCTGCAGCGAGATCATCTCCATG 190200 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAATTGCTGGCACTC--CAATCTGTTTGAGGAGAC 129845 || || || || | | | |||| | |||| ||| | | | || || | Sbjct 190201 AATTCGAACGGCTGCGTCGAGTGGTAG--TGCTTCTCCTCGCCGAGCGACACCAGCAGCC 190258 Query 129846 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTAC 129905 | |||| |||| |||| ||||||| | |||| ||| | |||||| || || || Sbjct 190259 GGTCCGCGACGAACTCGATGTACTGCGCCATCAGCTCCGCGTTCATGCCAATCAGCCGCA 190318 Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965 || |||||||| |||||||| | ||| |||| ||| || ||| | || | Sbjct 190319 CCGGCAGCGCGTCGCAGATGAACTCGCGCTCGATGTTCACCGCATCCACGATAATCTCCA 190378 Query 129966 GAATGGTCTC-CGTGCCAGGTCTATTGCGCAAAGTC----TTGAAGAGTTCCACG---GC 130017 | | | ||| || | ||| || ||| | || ||| | || || | || Sbjct 190379 GCACGCGCTCGCGCGGCAG--CTTGTGCTTGATGTGCGAGTTGTACAG---CAGGCATGC 190433 Query 130018 AAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGG 130077 || ||| ||| ||||||||||| || |||||||| || || ||| ||| ||||| Sbjct 190434 GAAGTCCGTGTGTAGACCCTCGTCGCGCGAGATGAGCTCGTTGCTGAACGTCAGCCCTGG 190493 Query 130078 CATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCC 130137 ||| ||||| |||||||||| |||||| | ||| || || || || || ||||| || || Sbjct 190494 CATCAGACCGCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCCGGAAAAGAAAATGCC 190553 Query 130138 CTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCA 130197 |||||| || || | | || ||||| || ||| | | | | | ||| Sbjct 190554 CTCCACCGCGGCAAAGCCGATCAGCCGCTCCTGAA---AGCTCGCGCTGCTCCCGATCCA 190610 Query 130198 CTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 130248 | || ||||||| |||||| |||| ||| ||||||| ||||| ||||| Sbjct 190611 CCGCACGGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGTATCGC 190661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618432602572160