Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq2 116 4e-21 >seq2 Length=1084633 Score = 116 bits (128), Expect = 4e-21 Identities = 555/865 (64%), Gaps = 19/865 (2%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 |||||| | ||||||||||| || || |||| ||||| || | ||| | | || Sbjct 753244 CCACAGCAGATGTTCATGCGTGTCGCTCTCGGCATTCACGGCGCAGATCTCAAGAACGTG 753185 Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 104341 ||||| |||||| ||||| | || | |||| ||||| || || |||||||| Sbjct 753184 CGTGAGACGTACGACCTCATGTCGAAGGGCTTCTTCACCCACGCCACCCCGACCCTCTTT 753125 Query 104342 AATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 104401 || || || || || | || |||||| | |||||||| | || ||||| ||| Sbjct 753124 AACGCCGGCACCCCGAAGCCGCAAATGAGCTCGTGCTTCCTGGTGGCGTCGAAGGAAGAC 753065 Query 104402 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCT-CAAAGTGGGCTGG 104460 ||| |||| ||||| | || || | |||||| ||| ||| ||||| || | || Sbjct 753064 AGCATCGACGGCATCTACGACACCCTGAAGGAGTGCGCGGTGATCAGCAAAGCGGCC-GG 753006 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAA-ATCTCGTATTCGGGGGACAA 104519 || ||||| ||||| | || | | | || | || || || || | Sbjct 753005 CGGCATTGGCCTGCACGTGCACAACATCCGCGCGGCGGGCAGCTAC-ATAGCTGGTACGA 752947 Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579 | || || | || | | |||||||| ||||| || ||| ||| || ||||| | Sbjct 752946 ACGGCACGTCGAACGGGCTCGTGCCAATGCTACGCGTCTTCAACAACACCGCCCGCTACG 752887 Query 104580 TAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACG 104636 | | || | ||| || || ||||| | | || |||||||| ||||| ||||||| Sbjct 752886 TGGACCAGGGTGGCGGTAAGCGCAAGGGCGCCTTTGCCGTCTATCTCGAGCCCTGGCACG 752827 Query 104637 CGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCC 104696 | || || | | || || | || | |||| || | || || ||| || Sbjct 752826 CCGACGTCTTTGGCTTTCTGCTGCTGAAACGCAACACGGGAAAAGATGACCAGCGCGCCC 752767 Query 104697 GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG-GAGAGT 104755 |||| ||||||| || || ||||| |||||||| || |||| | | || | | ||| Sbjct 752766 GCGACCTCTTCTATGCGCTGTGGATCCCAGATCTGTTTATGAGGCGTGTGAAAAGCGAGG 752707 Query 104756 GGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAG 104815 || || ||| | || | ||| ||| | || || ||| |||| | |||||| Sbjct 752706 GG-AAGTGGACGCTGATGGATCCCAACACGTGCCCGGGCCTCAGCGATTGCTATGGTGAG 752648 Query 104816 GAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCG-GGCGACTGCGACGGTGCC 104874 |||||||| || ||| |||||| || || || |||| | |||| | || Sbjct 752647 GAGTTTGAGCGGCTCTACGAGCGCTACGAGTCCGAGGGCCGCGGCGTC-AAGACGAT-CC 752590 Query 104875 AGCTGCC---GATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 104931 || ||| || |||||| || || || |||| || | |||||| || || | Sbjct 752589 AG--GCCCAGGAGGTGTGGTTTGCCATCCTGGAGTCGCAGATCGAGACGGGCGGGCCGTT 752532 Query 104932 CATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 104991 ||| || ||||| ||||| || ||| ||| || || |||||| | || |||||| Sbjct 752531 CATCCTCTACAAGGACGCATGCAACAGCAAGTCGAACCAGAAGAATCTTGGCACGATCAA 752472 Query 104992 GAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAG-ATGAGACGGCTGTGT 105050 | | || || || || || || || | || | || | | | | |||||||| |||| Sbjct 752471 GTGCTCGAACCTATGCACGGAGATTGTCGAGTACAC-GTCGCCGCAGGAGACGGCGGTGT 752413 Query 105051 GTAACCTCGCATCAATCGCTCTCCC 105075 | |||||||| || ||||| || || Sbjct 752412 GCAACCTCGCCTCCATCGCGCTGCC 752388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583258350304640