Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq2 217 2e-51 seq12 149 7e-31 seq4 145 9e-30 seq14 143 3e-29 seq72 105 8e-18 seq33 105 8e-18 seq22 95.1 1e-14 >seq2 Length=1084633 Score = 217 bits (240), Expect = 2e-51 Identities = 894/1386 (65%), Gaps = 44/1386 (3%) Strand=Plus/Plus Query 80395 GTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATC 80454 ||| | ||||| || ||||||||| ||||| ||||| | ||| ||| || ||||| Sbjct 751872 GTGAAGGGCTCGAAGCACTCGTTGTTGCCGAGAATCTGCGAGGTGGACGCGGTTGGCATG 751931 Query 80455 GGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTCGCGCAAATCTGAC 80514 ||| | |||| ||| || || |||| ||| || | | | | ||| | | ||| | Sbjct 751932 GGGGCAACCAGCAGGGAGTTGCGCATGCCCACCTGCATCACCTTCTC-CTTGAGGCTGGC 751990 Query 80515 CAAAAATCAACCCCAACGCTGT--GACC----------CCACATGTCGTGCTGCAAGATG 80562 | | || | | |||||| | || ||||| |||| ||||| ||| Sbjct 751991 CCAGTCCCAGCGAC--CGCTGTTGGGCCGCGCATTCCTCCACAGGTCGAACTGCAGAATG 752048 Query 80563 CCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCA 80622 ||||| ||||| |||| ||| |||||||||||||||||| ||| |||||||| Sbjct 752049 CCCTCACTGGCCGGGCTGCCCGTGAAGGTCTCGTACGGGCCCTCCTCCTTCGCCAGCTCC 752108 Query 80623 CACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGC-G 80681 |||| | | || || || || || |||| || |||||| |||| | Sbjct 752109 ATCGACGACTCGACCGCAGCAAAGTAGATCGTTTCGAAGATCTCCGCGTTCAC-CCGCTG 752167 Query 80682 CGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAAC 80741 ||||| | | | |||| || | ||| | ||||| |||| || || ||||| || Sbjct 752168 CGCCTCCGCCGAGACAAACGGCAGCCGCATGAGGATGAAGGCGTCCGCGAGCCCCTGCAC 752227 Query 80742 GCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCG-CTCGGCCTCCGGAATTGGGTAAA 80800 ||||| | |||| ||||||| |||| |||| || | || | || || ||||| Sbjct 752228 GCCGAGGCCGATGGGGCGGTTGCGCATGTTACTGCGGCGCGCCGTCTCGACC-GGGTAGT 752286 Query 80801 AGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTT 80860 |||| || || |||||||| ||||||||||| | | ||| || | || Sbjct 752287 AGTTGCGGTCAATAACGCGGTTGAGGTTGCGTGTGATCTGCTTTGTCACGGTGTAGAGAA 752346 Query 80861 TCTGAAAGTCGAATTGG---TTCCC--CTTC-ACAAATGCCGGAAGGCTCAGGGACGCCA 80914 ||| || | | | ||| | | || || || ||| || | ||| || | Sbjct 752347 GCTGGTGGTTCAGCTCGCGCTTCTCAACGTCGACGAAGCGCGGCAGCGCGATGGAGGCGA 752406 Query 80915 GATTGCACACGGCCACCTCTT-CAGCATCTGTAAACTCGACGATTTCCGTGCACAAATTA 80973 | |||||||| ||| ||| | | || | || ||||||| || |||||||| | || Sbjct 752407 GGTTGCACACCGCCGTCTCCTGCGGCGAC-GTGTACTCGACAATCTCCGTGCATAGGTTC 752465 Query 80974 GAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAG 81033 || |||| || || || || || |||||||| |||||| |||||| |||||||||||| Sbjct 752466 GAGCACTTGATCGTGCCAAGATTCTTCTGGTTCGACTTGCTGTTGCATGCGTCCTTGTAG 752525 Query 81034 CACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGC 81093 ||| |||| || ||||||| ||| |||| |||||||| ||| | ||| | Sbjct 752526 AGGATGAACGGCCCGCCCGTCTCGATCTGCGACTCCAGGATGGCAAACCACACCTCCTGG 752585 Query 81094 GCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTA-AGCTTCGTCGAA 81152 |||| || | |||| | ||| |||| | | || |||| ||| | || || Sbjct 752586 GCCTGGATCGTCTTGACGCCGCGGCCCTCGGACTCGTAGCGCTCGTAGAGCCGC-TCAAA 752644 Query 81153 CTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTC 81212 || |||| | || ||||| | |||||| ||| || |||||| ||| | Sbjct 752645 CTCCTCACCATAGCAATCGCTGAGGCCCGGGCACGTGTTGGGATCCATCAGCGTCCACTT 752704 Query 81213 GGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTC 81272 ||| | | ||| | |||| || || |||||||| || || ||| ||||| Sbjct 752705 CCCCTCGCTTTTCACACGCCTCATAAACAGATCTGGGATCCACAGCGCATAGAAGAGGTC 752764 Query 81273 GCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTC 81332 |||| |||| || || | ||| |||| | || | |||||| | | || ||| Sbjct 752765 GCGGGCGCGCTGGTCATCTTTTCCCGTGTTGCGTTTCAGCAGCAGAAAGCCAAAGACGTC 752824 Query 81333 CGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCG---ACGGCCACCCTGGTT 81389 || ||||| ||||| ||||| ||||| | | |||||||| || ||||||||||| Sbjct 752825 GGCGTGCCAGGGCTCGAGATAGACGGCAAAGGCGCCCTTGCGCTTACCGCCACCCTGGTC 752884 Query 81390 GACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACC 81449 ||||| ||||| || ||| || || || | ||| || | || || | ||| || Sbjct 752885 CACGTAGCGGGCGGTGTTGTTGAAGACGCGTAGCATTGGCACGAGCCCGTTCGACGTGCC 752944 Query 81450 GTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGAAAGACCGATGCC 81509 ||||||||| | || ||| ||||| | ||| | || || ||||| Sbjct 752945 GTTCGTACCAGCTATGTAGCTGCCCGCCGCGCGGATGTTGTGCACGTGCAGGCCAATGCC 753004 Query 81510 ACCTGACCACTTTG-AAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGC 81568 || | || ||||| ||| || ||| |||| ||| || || || || ||||||| Sbjct 753005 GCC-GGCCGCTTTGCTGATCACCGCGCACTCCTTCAGGGTGTCGTAGATGCCGTCGATGC 753063 Query 81569 TATCTTTTTTC-ATGTCA--AGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGG 81625 | |||| ||| | | || || ||| | |||| ||| || || | | ||||| Sbjct 753064 TGTCTTCCTTCGACGCCACCAGGAAGCACGAGCT---CATTTGCGGCTTCGGGGTGCCGG 753120 Query 81626 CATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTT 81685 | || || || || ||||| ||||| |||| | | || ||||| ||||| || || | Sbjct 753121 CGTTAAAGAGGGTCGGGGTGGCGTGGGTGAAGAAGCCCTTCGACATGAGGTCGTACGTCT 753180 Query 81686 CCTTGACG--CGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACATGTA 81743 | ||| | || | ||| | |||||||| |||| ||| |||||||| ||||| | Sbjct 753181 CACGCACGTTCTTG--AGATCTGCGCCGTGAATGCCGAGAGCGACACGCATGAACATCTG 753238 Query 81744 CTGGGG 81749 ||| || Sbjct 753239 CTGTGG 753244 Score = 122 bits (134), Expect = 1e-22 Identities = 290/431 (67%), Gaps = 12/431 (3%) Strand=Plus/Minus Query 31984 GACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCG 32043 |||||| ||||||| ||||||||| | | | | ||||| ||||| ||| || | Sbjct 180201 GACGGCTTCAAGCCCGGCCAGCGCAAGATCCTGTTCTCCTGCTTCAAGCGCAACTTGGTG 180142 Query 32044 AGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCAC 32103 | || ||||||| |||||| | |||||||| | ||||| | || || ||||| Sbjct 180141 AACTCTATCAAGGTGGTGCAGCTTGCTGGCTACGTCTCGGAGCACTCCGCGTACCACCAT 180082 Query 32104 GGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAAT 32163 |||||| ||||||| | || || ||| | || ||| ||||||| || || Sbjct 180081 GGCGAGCAGTCGCTCGTGCAGACGATCGTCGGAATGGCGCAGGACTTTGTGGGCAGCAAC 180022 Query 32164 AACCTGAACTTACTCGAGCCATC-TGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGA 32222 ||| | | || | || | ||| ||||| || || || || |||||||||||| Sbjct 180021 AACGTCCCGCTGCT-GCGCAAGGATGGTCAGTTCGGTACGCGTCTGCACGGTGGCAAGGA 179963 Query 32223 T---GCTGCGAGCTCCCGTTACATCTTCACCCGTCTC--GCACCTTCGACGCGCAAGATT 32277 || ||| || || |||||||||||||| ||| ||| ||| | || || Sbjct 179962 CCACGCCGCGGGC---CGCTACATCTTCACCCGGCTCATGCA-GGTCG-CCCGGGCCATC 179908 Query 32278 TTCGACCCGTCGGACGATGCGGTGCTCAAGTACAATTTTGATGACGGTCAGCGGGTCGAG 32337 || ||||| | ||||| ||| || ||||||| || ||||||| ||| ||| Sbjct 179907 TTTCACCCGGCCGACGACTTTGTGGTCGAGTACAAGGACGACGACGGTCTCTCGGTGGAG 179848 Query 32338 CCGGTGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGA 32397 || | ||||||| |||||| | |||||| | |||||||||| | |||||||| Sbjct 179847 CCTTTCTTCTACATTCCGGTCATCCCGATGGTGCTGGTGAACGGCACGACGGGCATCGGC 179788 Query 32398 ACGGGGTTCAG 32408 || |||||||| Sbjct 179787 ACCGGGTTCAG 179777 >seq12 Length=572832 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || |||||||| ||||||||||| || | || ||||| ||| | | Sbjct 485140 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCGCTGGAGGTGGAGCCGAGC 485199 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| ||||||| || || |||||||||||||| || || || |||||| Sbjct 485200 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAG 485259 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||| || ||||| | || || || | ||||| || Sbjct 485260 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTCTCGGACTACAAC 485319 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || || || || |||| || ||||| || Sbjct 485320 ATCCAGAAGGAGTCCACGCTGCACCTGGTGCTGCGCCTGCGCGGCGG 485366 >seq4 Length=1102922 Score = 145 bits (160), Expect = 9e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| || |||||||| ||||||||||| || | || ||||| ||| | | Sbjct 384508 AATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCGCTGGAGGTGGAGCCGAG 384449 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | || | || ||||||| || || |||||||||||||| || || || ||||| Sbjct 384448 CGACACGATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCA 384389 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||||| || || || || || ||||| || ||||| | || || || | ||||| || Sbjct 384388 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTCTCGGACTACAA 384329 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || || || || |||| || ||||| || Sbjct 384328 CATCCAGAAGGAGTCCACGCTGCACCTGGTGCTGCGCCTGCGCGGCGG 384281 >seq14 Length=517377 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || |||||||| ||||||||||| || | || ||||| ||| | | Sbjct 230697 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCGCTGGAGGTGGAGCCGAGC 230756 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || ||||||| || || |||||||||||||| || || || |||||| Sbjct 230757 GACACGATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAG 230816 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||| || ||||| | || || || | ||||| || Sbjct 230817 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTCTCGGACTACAAC 230876 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || || || || |||| || ||||| || Sbjct 230877 ATCCAGAAGGAGTCCACGCTGCACCTGGTGCTGCGCCTGCGCGGCGG 230923 >seq72 Length=122406 Score = 105 bits (116), Expect = 8e-18 Identities = 99/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 64729 TTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAA 64788 |||||| ||||| || ||||||||||| ||||| ||||| | | |||||||| || Sbjct 112771 TTTGCCGCGGTGGAGGGCATTTTCTTTTCCGGGTCGTTCTGCGCGCTGTTCTGGCTGAAG 112830 Query 64789 AAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGGG 64848 ||||| || ||||||||||| ||| |||| |||||||| ||||| || |||||||| Sbjct 112831 AAGCGCGGTCTGATGCCAGGGCTGACGTTCAGCAACGAGCTCATCTCGCGCGACGAGGGT 112890 Query 64849 CTCCAC 64854 || ||| Sbjct 112891 CTACAC 112896 >seq33 Length=364854 Score = 105 bits (116), Expect = 8e-18 Identities = 99/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 64729 TTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAA 64788 |||||| ||||| || ||||||||||| ||||| ||||| | | |||||||| || Sbjct 190568 TTTGCCGCGGTGGAGGGCATTTTCTTTTCCGGGTCGTTCTGCGCGCTGTTCTGGCTGAAG 190509 Query 64789 AAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGGG 64848 ||||| || ||||||||||| ||| |||| |||||||| ||||| || |||||||| Sbjct 190508 AAGCGCGGTCTGATGCCAGGGCTGACGTTCAGCAACGAGCTCATCTCGCGCGACGAGGGT 190449 Query 64849 CTCCAC 64854 || ||| Sbjct 190448 CTACAC 190443 >seq22 Length=440616 Score = 95.1 bits (104), Expect = 1e-14 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 32052 GAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCACGGCGAGGC 32111 ||||||||| ||||||||||||||| | ||||| |||| | |||||||||||||| Sbjct 100739 GAAGGTGGCACAGCTGTCGGGCTACATCTCAGAGGCGTCGGCGTTCCACCACGGCGAGGC 100798 Query 32112 GTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAA 32171 ||||| |||| ||||| || || | || |||||||| ||| | || ||| | || Sbjct 100799 CTCGCTGCAGGAGACCATCGTGAAGATGGCGCAGAACTTCACCGGCGGCAACAACATCAA 100858 Query 32172 CTTACTCGAGCCATCTGGACAGTTTGG 32198 | | |||| |||| || ||||| || Sbjct 100859 CCTGCTCGTGCCAGAGGGCCAGTTCGG 100885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570308004696320