Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq14 107 1e-18 seq12 104 1e-17 seq4 104 1e-17 >seq14 Length=517377 Score = 107 bits (118), Expect = 1e-18 Identities = 168/235 (71%), Gaps = 4/235 (2%) Strand=Plus/Minus Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537 ||||||| | || |||| ||||| || || ||| |||||| || ||||| || || | Sbjct 230925 CGCCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCG 230866 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 | || || || | || || || || || ||||| || || | ||||| |||||||||| Sbjct 230865 AGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCG 230806 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTC 34655 | | ||||||||||| |||| || | || ||| | || ||||| ||| ||| Sbjct 230805 GGATGCCCTCCTTGTCCTGGATC-TTGGCCTTCACGTTCTCGATCGTGTCGCTCG-GCTC 230748 Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 ||| |||| | ||||| || ||||| | ||| ||||| || ||||||||| || Sbjct 230747 CACCTCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATGGTG 230693 >seq12 Length=572832 Score = 104 bits (114), Expect = 1e-17 Identities = 172/243 (71%), Gaps = 4/243 (2%) Strand=Plus/Minus Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537 ||||||| | || |||| ||||| || || ||| |||||| || ||||| || || | Sbjct 485368 CGCCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCG 485309 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 | || || || | || || || || || ||||| || || | ||||| |||||||||| Sbjct 485308 AGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCG 485249 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTC 34655 | | ||||||||||| |||| || | || || | || ||||| ||| ||| Sbjct 485248 GGATGCCCTCCTTGTCCTGGATC-TTGGCCTTCACATTCTCGATCGTGTCGCTCG-GCTC 485191 Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGATTGT 34715 ||| |||| | ||||| || ||||| | ||| ||||| || ||||||||| || | || Sbjct 485190 CACCTCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATGGTGGTGGT 485131 Query 34716 ATG 34718 || Sbjct 485130 GTG 485128 >seq4 Length=1102922 Score = 104 bits (114), Expect = 1e-17 Identities = 164/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| | || |||| ||||| || || ||| |||||| || ||||| || || || Sbjct 384280 GCCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGA 384339 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | || || || || || ||||| || || | ||||| ||||||||||| Sbjct 384340 GAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGG 384399 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCC 34656 | ||||||||||| |||| || | || ||| | || ||||| ||| |||| Sbjct 384400 GATGCCCTCCTTGTCCTGGATC-TTGGCCTTCACGTTCTCGATCGTGTCGCTCG-GCTCC 384457 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || |||| | ||||| || ||||| | ||| ||||| || |||||||| Sbjct 384458 ACCTCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 384507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314728311182288