Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq63 170 2e-37 >seq63 Length=164469 Score = 170 bits (188), Expect = 2e-37 Identities = 469/708 (66%), Gaps = 13/708 (2%) Strand=Plus/Plus Query 6553 GTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCA-ACC 6611 |||||| |||||| || || || || | || ||||| ||||| ||||| || ||| Sbjct 126574 GTGGTTGCGGTAGACGTGGGCGTCGCCGAGGGTGTGCACAAGCTCACCAGGCCGCAGACC 126633 Query 6612 CCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCC 6671 | || | || || || | | |||||||| ||||| || |||||||| || || | Sbjct 126634 CGTCGCCTTG-GCAATGAGGATGGTGAGCAGCGCGTAGGAGGCGATGTTGAAGGGGACGC 126692 Query 6672 CTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCC-CAT-TC-GCG- 6727 | | |||||||| | ||| || || || | | |||||| ||||| | | | || | | Sbjct 126693 CAAGACCCATGTCGCACGAGCGCTGGTACAACATGCAGGATAGCTCGCTCGTGTCTGTGT 126752 Query 6728 --ACGTAGAATTG-GCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTC 6784 |||||||| || ||| || ||||||||| || ||||||||| | || | | Sbjct 126753 TCACGTAGAACTGAGCA-AGCAAGTGGCACGGCGGCAGCGCCATCTTTTGCAGCGCGCAC 126811 Query 6785 GGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATC 6844 |||||||| || | || || | | ||| | |||||| ||| | ||| || | Sbjct 126812 GGGTTCCAGGCAGTGACCAGGAGGCGGCGGTCGTTCGGGTTCGCCTTGATGGTCTCCACG 126871 Query 6845 ACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCC 6904 | | || | ||||||| | || | || |||| ||| || |||| || || Sbjct 126872 ATGAGCTTGATCTGGTCCACCCCTTCGCCGTCGTAGTTCGCCTCAAACCCCTTGTAATCT 126931 Query 6905 GCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGAT 6964 ||||| ||||| | ||||||||| |||||||| ||||| | ||| ||||| | Sbjct 126932 GCCCCGAAGTGGCGCCACTGGAAGCCGTAGACAGGGCCGAGGTCCATCTCCTTATTCTCT 126991 Query 6965 GGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCC 7024 | || || || |||| ||||| || || || |||| |||||||||| | | || Sbjct 126992 GTCAAGCCGCGGCTGTCGAGAAACTCGCGCGAGCCGTTGCCGTCCCAGATGTGAATGTCC 127051 Query 7025 CGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACC 7084 | | ||| || | |||| |||| | || ||||||||||||||||||| | Sbjct 127052 TTGTCTGCCAGCAGCTGCGCACTCGTCTCCCCGCGCAGGAACCACAGCAGCTCCTCGCAC 127111 Query 7085 ACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGGAA---ATTCGCCCCGAAGGTTG 7141 ||||| |||| | ||||| ||||||||||||||||| | | | | || ||| | Sbjct 127112 ACGCCGCGCCAGAAGACACGCTTCGTCGTCAGCAGCGGCAGGCGGTTGTCGCGCAGGGAG 127171 Query 7142 TATCGGGCCTGTGTGCCGAACACGGAGAGGGTCCCCGTCCCGGTCCGGTCCCCCTTCCGG 7201 | || ||| | |||||| | | || ||| ||| ||||| |||||| ||||| | Sbjct 127172 AAGCGCATCTGGGCGCCGAAGAGGCCGATGGTGCCCACGCCGGTGCGGTCCTCCTTCACG 127231 Query 7202 TAGCCCTCCCTGAGGATCCGCGCCACCTGATACAGATACTGCCACTCC 7249 ||| | | | ||| ||| | | | | | || ||||||| |||| Sbjct 127232 ATCCCCGTCTTCATGATGCGCTCAATCAGCTCAAGGTACTGCCGCTCC 127279 Score = 170 bits (188), Expect = 2e-37 Identities = 469/708 (66%), Gaps = 13/708 (2%) Strand=Plus/Minus Query 34096 GGAGTGGCAGTATCTGTATCAGGTGGCGCGGATCCTCAGGGAGGGCTACCGGAAGGGGGA 34155 |||| ||||||| || | | | | | ||| ||| | | | ||| | ||||| ||| Sbjct 127279 GGAGCGGCAGTACCTTGAGCTGATTGAGCGCATCATGAAGACGGGGATCGTGAAGGAGGA 127220 Query 34156 CCGGACCGGGACGGGGACCCTCTCCGTGTTCGGCACACAGGCCCGATACAACCTTCGGGG 34215 ||| ||||| ||| ||| || | | |||||| | ||| || | | ||| || | Sbjct 127219 CCGCACCGGCGTGGGCACCATCGGCCTCTTCGGCGCCCAGATGCGCTTCTCCCTGCGCGA 127160 Query 34216 CGAAT---TTCCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCT 34272 | | | ||||||||||||||||| ||||| | |||| |||||| ||||||||| Sbjct 127159 CAACCGCCTGCCGCTGCTGACGACGAAGCGTGTCTTCTGGCGCGGCGTGTGCGAGGAGCT 127100 Query 34273 GCTGTGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGAT 34332 |||||||||| || | |||| |||| | || ||| | | || | | || Sbjct 127099 GCTGTGGTTCCTGCGCGGGGAGACGAGTGCGCAGCTGCTGGCAGACAAGGACATTCACAT 127040 Query 34333 CTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGA 34392 |||||||| |||| || || || ||||| |||| || || || || |||| Sbjct 127039 CTGGGACGGCAACGGCTCGCGCGAGTTTCTCGACAGCCGCGGCTTGACAGAGAATAAGGA 126980 Query 34393 GGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGG 34452 | ||| | ||||| |||||||| ||||||||| | ||||| ||||| || || ||| Sbjct 126979 GATGGACCTCGGCCCTGTCTACGGCTTCCAGTGGCGCCACTTCGGGGCAGATTACAAGGG 126920 Query 34453 GAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTT 34512 | || ||| |||| || | || | ||||||| | || | | | || ||| | Sbjct 126919 GTTTGAGGCGAACTACGACGGCGAAGGGGTGGACCAGATCAAGCTCATCGTGGAGACCAT 126860 Query 34513 GAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCC 34572 ||| |||||| | ||| | | || || | || ||||||||| | || | Sbjct 126859 CAAGGCGAACCCGAACGACCGCCGCCTCCTGGTCACTGCCTGGAACCCGTGCGCGCTGCA 126800 Query 34573 TCTGATGGCGCTCCCCCCGTGCCACACCCTCTGC-CAATTCTACGT---CGC-GA-ATG- 34625 ||||||||| || ||||||||| || ||| || |||||||| | | || | | Sbjct 126799 AAAGATGGCGCTGCCGCCGTGCCACTTGCT-TGCTCAGTTCTACGTGAACACAGACACGA 126741 Query 34626 GGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCA 34685 | ||||| |||||| | | || || || ||| | |||||||| | || || || |||| Sbjct 126740 GCGAGCTATCCTGCATGTTGTACCAGCGCTCGTGCGACATGGGTCTTGGCGTCCCCTTCA 126681 Query 34686 ACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGT-TGGTTCCT 34744 |||| || ||||| |||||||| | | || || || | || |||| || ||| Sbjct 126680 ACATCGCCTCCTACGCGCTGCTCACCATCCTCATTGC-CAAGGCGACGGGTCTGCGGCCT 126622 Query 34745 GGGGAGCTGGTGCATACGTTGGGGGATGCGCATATCTACCTGAACCAC 34792 || ||||| ||||| || | || || || || |||||| |||||| Sbjct 126621 GGTGAGCTTGTGCACACCCTCGGCGACGCCCACGTCTACCGCAACCAC 126574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448260517297920