Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq63 107 2e-18 seq67 96.9 3e-15 >seq63 Length=164469 Score = 107 bits (118), Expect = 2e-18 Identities = 391/610 (64%), Gaps = 20/610 (3%) Strand=Plus/Plus Query 29632 CTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGT 29691 ||||||||| | | || | || ||||||| |||||||||| || || || ||||| Sbjct 126547 CTCGAGCTGCGCCTTGAGGGCATCAACGTGGTTGCGGTAGACGTGGGCGTCGCCGAGGGT 126606 Query 29692 GTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGA 29751 ||| |||| ||| || || || || || | | || || | | ||||| || | Sbjct 126607 GTGCACAAGCTCACCAGGCCGCAGACCCGTCGCCTTGGCAATGAGGATGGTGAGCAGCGC 126666 Query 29752 GTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTG 29811 |||| ||||||||| ||||| || || || |||||||| | || | |||||| | | Sbjct 126667 GTAGGAGGCGATGTTGAAGGGGACGCCAAGACCCATGTCGCACGAGCGCTGGTACAACAT 126726 Query 29812 GCACGAGAGCTCTCC---GTC---GCTCACGTAAAACTGACACATGGCA-TGGCACGGAG 29864 ||| || ||||| | ||| | ||||||| |||||| || | | |||||||| | Sbjct 126727 GCAGGATAGCTCGCTCGTGTCTGTGTTCACGTAGAACTGAG-CAAGCAAGTGGCACGGCG 126785 Query 29865 GAAGGGCCATGAGACCCAAGTCTTTGGGGTTCCAGGCACACACGATGATGCGCCTGTCTT 29924 | || ||||| || | |||||||||||| || | || ||| | ||| | Sbjct 126786 GCAGCGCCATCTTTTGCAGCGCGCACGGGTTCCAGGCAGTGACCAGGAGGCGGCGGTCGT 126845 Query 29925 CTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCG-AG 29983 ||||| | ||||| |||||| | | | ||| |||| |||| || ||| | Sbjct 126846 TCGGGTTCGCCTTGATGGTCTCCACGATGAGCTTGATCTGGTCCA-CCCCTTCGCCGTCG 126904 Query 29984 TAGTCTGNNNNNNNNNNNNNNNNNNNNNNNNCGAAATGCCTCCACTGGAACCCGTACACC 30043 |||| | |||| || | ||||||||| ||||| || Sbjct 126905 TAGTTCGCCTCAAACCCCTTGTAATCTGCCCCGAAGTGGCGCCACTGGAAGCCGTAGACA 126964 Query 30044 GGTCCCAGG----TCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCT 30099 || || ||| ||||| | ||| |||| ||||| | |||| | ||| || | Sbjct 126965 GGGCCGAGGTCCATCTCCTTATTCTCTGT----CAAGCCGCGGCTGTCGAGAAACTCGCG 127020 Query 30100 GGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGA 30159 || |||||| |||||||||| | | |||| || | ||| | | | || Sbjct 127021 CGAGCCGTTGCCGTCCCAGATGTGAATGTCCTTGTCTGCCAGCAGCTGCGCACTCGTCTC 127080 Query 30160 CCCTCTGACGAACCACAGCAGCTCCTC-CACGACGGCCTTCCAAAAGACCCTCTTGGTCG 30218 ||| | | |||||||||||||||||| ||| ||| | ||| ||||| | ||| |||| Sbjct 127081 CCCGCGCAGGAACCACAGCAGCTCCTCGCAC-ACGCCGCGCCAGAAGACACGCTTCGTCG 127139 Query 30219 TGAGGAGGGG 30228 | || || || Sbjct 127140 TCAGCAGCGG 127149 >seq67 Length=156592 Score = 96.9 bits (106), Expect = 3e-15 Identities = 112/147 (76%), Gaps = 8/147 (5%) Strand=Plus/Minus Query 53531 ATGGGCGACAAGTT-TGCATCCTTCACGGCGCAAAAGGGGACATGCGGAGCGGTCCTGAC 53589 || ||||||||||| |||| || ||||| ||||| || || ||| ||| | Sbjct 40640 ATCGGCGACAAGTTCTGCAGCCGCCACGGA-CAAAAAGGCACCAACGGCA---TCCAGTT 40585 Query 53590 TC---AGGAGGACATGCCCTTCGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCC 53646 || ||||||||||||||||| || ||||| | ||||| ||||||||||||||||| Sbjct 40584 TCGCCAGGAGGACATGCCCTTCAACCGCGACGGCATCGTGCCGGACCTCATCATCAACCC 40525 Query 53647 CCACGCCTTTCCCTCCAGGATGACGGT 53673 ||||||| |||||||| | ||||| || Sbjct 40524 CCACGCCATTCCCTCCCGCATGACAGT 40498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406161536761696