Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq12 95.1 3e-14 seq4 91.5 3e-13 seq14 89.7 1e-12 >seq12 Length=572832 Score = 95.1 bits (104), Expect = 3e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || || || ||||| || ||||||||||| || | | || | || || Sbjct 485351 AGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCCTCC 485292 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | ||||||||||| || ||| || ||||| || Sbjct 485291 TCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 485232 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || ||| |||| | |||| ||| || || || | || || Sbjct 485231 TGGATCTTGGCCTTCACATTCTCGATCGTGTCGCTCGGCTCCACCTCCAGCGCGATCGTC 485172 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || ||||||||||||| |||||| Sbjct 485171 TTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 485140 >seq4 Length=1102922 Score = 91.5 bits (100), Expect = 3e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || || || ||||| || ||||||||||| || | | || | || || Sbjct 384296 AGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCCTCC 384355 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | ||||||||||| || ||| || ||||| || Sbjct 384356 TCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 384415 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || || |||| | |||| ||| || || || | || || Sbjct 384416 TGGATCTTGGCCTTCACGTTCTCGATCGTGTCGCTCGGCTCCACCTCCAGCGCGATCGTC 384475 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||||| || || ||||||||||||| ||||||| Sbjct 384476 TTGCCGGTCAGCGTCTTCACGAAGATCTGCATT 384508 >seq14 Length=517377 Score = 89.7 bits (98), Expect = 1e-12 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || || || ||||| || ||||||||||| || | | || | || || Sbjct 230908 AGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCCTCC 230849 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | ||||||||||| || ||| || ||||| || Sbjct 230848 TCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 230789 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || || |||| | |||| ||| || || || | || || Sbjct 230788 TGGATCTTGGCCTTCACGTTCTCGATCGTGTCGCTCGGCTCCACCTCCAGCGCGATCGTC 230729 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || ||||||||||||| |||||| Sbjct 230728 TTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 230697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153815832801456