Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq4 168 1e-36 seq14 167 5e-36 seq12 161 2e-34 seq2 113 9e-20 seq72 102 2e-16 seq33 95.1 3e-14 >seq4 Length=1102922 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || |||||||| || ||||| || | |||| || || |||||||||||||| | Sbjct 384281 CCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGAG 384340 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||||||||| ||||| || || || ||||| ||||||| || || ||||| ||| Sbjct 384341 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG 384400 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| || || ||| | ||||| ||||| | || || Sbjct 384401 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATCGTGTCGCTCGGCTCCACC 384460 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || || | ||||||||| || |||| ||||| ||||| ||||||||| Sbjct 384461 TCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATT 384508 >seq14 Length=517377 Score = 167 bits (184), Expect = 5e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || |||||||| || ||||| || | |||| || || |||||||||||||| | Sbjct 230923 CCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGAG 230864 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||||||||| ||||| || || || ||||| ||||||| || || ||||| ||| Sbjct 230863 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG 230804 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| || || ||| | ||||| ||||| | || || Sbjct 230803 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATCGTGTCGCTCGGCTCCACC 230744 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || | ||||||||| || |||| ||||| ||||| |||||||| Sbjct 230743 TCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 230697 >seq12 Length=572832 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || |||||||| || ||||| || | |||| || || |||||||||||||| | Sbjct 485366 CCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGAG 485307 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||||||||| ||||| || || || ||||| ||||||| || || ||||| ||| Sbjct 485306 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG 485247 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| || || || | ||||| ||||| | || || Sbjct 485246 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGCTCGGCTCCACC 485187 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || | ||||||||| || |||| ||||| ||||| |||||||| Sbjct 485186 TCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 485140 >seq2 Length=1084633 Score = 113 bits (124), Expect = 9e-20 Identities = 233/341 (68%), Gaps = 12/341 (4%) Strand=Plus/Plus Query 273780 GTGAAAATGTACCTGGCACTCG-CATGGTCCTTGCCACCTTGCAGCCTCGAACCAAACTG 273838 ||||| ||||| | ||| | || | |||||||||||||| ||||| | || ||| ||||| Sbjct 179936 GTGAAGATGTAGC-GGCCCGCGGCGTGGTCCTTGCCACCGTGCAGACGCGTACCGAACTG 179994 Query 273839 AC---CCTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAATCCTGAGCCATATT 273895 || ||| | |||| ||| | | ||||||||| || || | ||||| ||||| Sbjct 179995 ACCATCCTTGCGCAGCAGCGGG---ACGTTGTTGCTGCCCACAAAGTCCTGCGCCATTCC 180051 Query 273896 CACGATAGTCCCCTGAAGGGATACCTCGCCGTGGTGATAGGCGCTGTGTTCGGCGATATA 273955 ||||| ||| | || || |||||| ||||| || ||| ||| || | || || Sbjct 180052 GACGATCGTCTGCACGAGCGACTGCTCGCCATGGTGGTACGCGGAGTGCTCCGAGACGTA 180111 Query 273956 ACCACTGAACTGAGCAACCTTCACATCGCTCGTCAAGTTTCGCTTGAATGCGGAATACAA 274015 ||| | ||| | ||||| | | | || |||||| |||||||| ||| ||| Sbjct 180112 GCCAGCAAGCTGCACCACCTTGATAGAGTTCACCAAGTTGCGCTTGAAGCAGGAGAACAG 180171 Query 274016 CACCTTCCGCTGCGAGGGCTTGAACCCATCAACGACCGATGGAATACTGCGTTCCAAATC 274075 | ||| ||||| ||||||||| || |||| || || || ||||| || | || Sbjct 180172 GATCTTGCGCTGGCCGGGCTTGAAGCCGTCAATCACGCTCGGGATGCTGCGCTCGCAGTC 180231 Query 274076 ATACCGA--GAGAACAAAATCAGTTCCTTGTCAATGAAGTC 274114 ||| ||||| | |||||| |||||||| | ||||| Sbjct 180232 --GGCGATGGAGAAGAGAATCAGCTCCTTGTCCACAAAGTC 180270 Score = 87.8 bits (96), Expect = 4e-12 Identities = 325/505 (64%), Gaps = 11/505 (2%) Strand=Plus/Minus Query 299602 AACATGCTGCGCCGCCCCATCGGCGTGGGGGTACAAGGACTTCAGGATGTGTTCTTCAAA 299661 ||||||| ||||||||||||| | || || || || || ||| | ||| || Sbjct 752257 AACATGCGCAACCGCCCCATCGGCCTCGGCGTGCAGGGGCTCGCGGACGCCTTCATCCTC 752198 Query 299662 CTGAAGCTCCCATTTGACTCTCCGGAGGC-CAGGGATCTTAACCGGGAAATCTTCGAGCA 299720 || ||| || |||| ||| ||||||| ||| | | ||| ||| |||||||| Sbjct 752197 ATGCGGCTGCCGTTTGTCTCGGCGGAGGCGCAGCG-GGTGAACGCGGAGATCTTCGAAAC 752139 Query 299721 TATCTACTACGCTGCCGTTGAAGCGTCGGTAGAACTCGCGGAAATCCACGGGCCTCACCC 299780 ||||||| ||||| || || ||||| | || || ||| | | || || || Sbjct 752138 GATCTACTTTGCTGCGGTCGAGTCGTCGATGGAGCTGGCGAAGGAGGAGGGCCCGTACGA 752079 Query 299781 CACCTTCGAAGGGTCTCCTGCAAGTAAGGGCATCCTCCAATACCACTTGT---GGGATGT 299837 |||||| || || || ||| ||||||| || || | | || ||| || ||| Sbjct 752078 GACCTTCACGGGCAGCCCGGCCAGTGAGGGCATTCTGCAGTTCGACCTGTGGAGGAATGC 752019 Query 299838 TACCCCCAAAAGCGATCTC---GACTGGCGAGGACTCGAGGAACGCGTAAAGAAGGGGG- 299893 ||||| |||| || | |||||| | ||| |||| || | | ||| || Sbjct 752018 GCGGCCCAACAGCGGTCGCTGGGACTGGGCCAGCCTCAAGGAGAAGGTGATGCAGGTGGG 751959 Query 299894 --TGCGGAACTCTCTACTGACCGCCCTCATGCCCACCGCAAGCACCGCCCAGATTTGCGG 299951 |||| ||||| || ||| |||| |||||| ||||| |||| | |||||| ||| Sbjct 751958 CATGCGCAACTCCCTGCTGGTTGCCCCCATGCCAACCGCGTCCACCTCGCAGATTCTCGG 751899 Query 299952 AAGTGTAGAAGCATTCGAACCCATCACTTCGAATCTATATTCCAGACGCACTCTGGCCGG 300011 | || ||||| ||| |||| ||||| | || | | || ||| ||| Sbjct 751898 CAACAACGAGTGCTTCGAGCCCTTCACCTCGAACATCTACGTCCGCCGTGTGCTGAGCGG 751839 Query 300012 TGAATTCCCCGTCGTTAACTCATATCTCGTCAGGGAACTCATCGAACGCGGTACTTGGAG 300071 || ||||| || || ||| || ||||||| ||| ||||||| || ||| |||| Sbjct 751838 CGAGTTCCCTGTTGTGAACAAGTACCTCGTCATGGACCTCATCGCGCGTGGTCTATGGAA 751779 Query 300072 TGAGAAAATGAAAAACCAAATCATC 300096 ||| ||| |||| | |||||| Sbjct 751778 CGAGTCGATGCGAAACGAGATCATC 751754 >seq72 Length=122406 Score = 102 bits (112), Expect = 2e-16 Identities = 151/213 (71%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 230193 GAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGGGG 230252 |||||||| |||||||| | || || || || |||||||| || || || |||| | Sbjct 112996 GAGTTCATCTGCGACGCGCTGCCGGTGCGGCTGATTGGCATGAACGCGGAGCTGATGGCG 113055 Query 230253 CAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGTAT 230312 || || ||||| ||||| || || || | | ||| |||| || | ||||| || Sbjct 113056 CAGTACATCGAGTTCGTCGCGGACCGGCTGCTGGTGTCGCTCGGCGAGGAGAAGCACTAC 113115 Query 230313 AACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACTTC 230372 |||| | | | || |||| || |||||| | || || || ||||| ||||| |||||| Sbjct 113116 CACTCGACGCAGCCATTCGACTTCATGGAGATGATCTCTCTGCAGGGCAAAACGAACTTC 113175 Query 230373 TTCGAAAAGCGTGTCAGCGATTATCA-AAGGCC 230404 ||||| ||| | || | || || || |||||| Sbjct 113176 TTCGAGAAGAGGGTGGGGGAGTACCAGAAGGCC 113208 >seq33 Length=364854 Score = 95.1 bits (104), Expect = 3e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 230193 GAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGGGG 230252 |||||||| |||||||| | || || || || |||||||| || || || |||| | Sbjct 190343 GAGTTCATCTGCGACGCGCTGCCGGTGCGGCTGATTGGCATGAACGCGGAGCTGATGGCG 190284 Query 230253 CAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGTAT 230312 || || ||||| ||||| || || || | | ||| |||| || | ||||| || Sbjct 190283 CAGTACATCGAGTTCGTCGCGGACCGGCTGCTGGTGTCGCTCGGCGAGGAGAAGCACTAC 190224 Query 230313 AACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACTTC 230372 |||| | | | || |||| || |||||| | || || || ||||| ||||| |||||| Sbjct 190223 CACTCGACGCAGCCGTTCGAATTCATGGAGATGATCTCGCTGCAGGGCAAAACAAACTTC 190164 Query 230373 TTCGA 230377 ||||| Sbjct 190163 TTCGA 190159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046734693787744