Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptomonas_20seymouri_20[genbank_20GCA_5F001299535.1_202015-09-25] 1,216 sequences; 27,764,161 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq176 190 2e-43 >seq176 Length=55057 Score = 190 bits (210), Expect = 2e-43 Identities = 500/745 (67%), Gaps = 30/745 (4%) Strand=Plus/Plus Query 145538 AGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCT 145597 |||||||||| ||||| ||||| || ||| ||| |||| || ||| | | | |||| Sbjct 7961 AGACCGCCATGTCCATCTTGATGGTCGGGTGCGGGAAGTAGTCCACCACCTCCATGTCCG 8020 Query 145598 CCGCCCTGAAGTCATCTATGTCCTC-CACCCGCCTCAGGATCCTGAGC-CTGGGAAAGGG 145655 |||| | | || || ||| ||| | | ||| | | || ||| | ||||| | Sbjct 8021 TCGCCTCGTAATCCTCCATGAACTCACGCTCGCGATTGAACACT-AGCACCGGGAACGCA 8079 Query 145656 CCGGGGGCTC-CTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCG 145714 | || | | || | ||||| ||||| | ||| || || || ||||||||| | Sbjct 8080 CGCGGCACGCGCT--TTAGCTGCTCTTTCAGCGCCTCGACATGATTTCTGTAGACGTGAG 8137 Query 145715 CGTCCCCCAGGACGTGGATGAAGTC-CCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATG 145773 | || ||||| ||| | | || ||||| | | |||||||| | || | || | Sbjct 8138 CATCGCCCAGCGTGTGCACCAGTTCACCCGGACGC-AGGCCCGTCGCCTTCGCAATCA-G 8195 Query 145774 TAG-GTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGA 145832 || |||| |||||||| ||| |||||||||||||| || || |||||||| | ||| Sbjct 8196 TATCGTCAAGAGGGAGTACGAGGCGATGTTGAAGGGCACGCCAAGGCCCATGTCACACGA 8255 Query 145833 GCGCTGGTACAGCTGGCAGGAGAGCTC---CCCGCCCG---CCACGTAGAACTGGCACAG 145886 ||||||||||||| ||| |||||||| | ||| |||||||||||||| ||| Sbjct 8256 GCGCTGGTACAGCATGCATGAGAGCTCCGACTTTTCCGTGTTCACGTAGAACTGGCCCAG 8315 Query 145887 GAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGAC 145946 | |||||| || ||||| ||||| || ||| | | ||||||||| ||| ||| || Sbjct 8316 TAAGTGGCAAGGGGGCAGCGCCATCTTGGACAGCGCGGACGGGTTCCACGCGATGAAGAG 8375 Query 145947 GAGCCTCCTG-CTCTCGGGGTTCCTCTTGA---TCTCCCCTATCAGGTCCCTGAGCTGGT 146002 | || | | | | || || || |||| | | | | |||| | ||| ||| | Sbjct 8376 CATCCGACGGTCGTTTGGATTTTCT-TTGAGCGTGTTCACGATCA---TCTTGATCTGAT 8431 Query 146003 CCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCC 146062 ||||||||| || ||||| | | | || || |||| | || || ||||| | || Sbjct 8432 CCACGCCCTCACCTTCGTAATTCGCGTCGCAGCCCTTGTACTCCGCGCCAAAGTGGCGCC 8491 Query 146063 ACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCC---AGCCCGGCCC 146119 ||||||| |||||||| || ||||||||| |||| ||| | || |||||| | Sbjct 8492 ACTGGAAGCCGTAGACTGGGCCCAGGTCC---ATCTCCTTGTTCTCCGTGAGCCCGCGGC 8548 Query 146120 GGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCT 146179 | | ||||| || || || |||||| | |||||||| | | | || | ||| || Sbjct 8549 TGTCAAGGAACTCGCGCGAGCCGTTGCCATCCCAGATGTGAATGTCCTTGTCGGCCAGGA 8608 Query 146180 CATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGA 146239 | || || ||| || | | |||||| | |||||| || ||| || | ||||| Sbjct 8609 GCTGGGCGTTCGTCTCACCACGCAGGAACCATATCAGCTCCTCACAGACACCACGCCAGA 8668 Query 146240 AGACCCTCTTGGTGGTCAGCAGGGG 146264 | || | ||||| || ||||| || Sbjct 8669 ACACACGTTTGGTCGTAAGCAGCGG 8693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590067830832640