Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptomonas_20seymouri_20[genbank_20GCA_5F001299535.1_202015-09-25] 1,216 sequences; 27,764,161 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq176 140 3e-28 >seq176 Length=55057 Score = 140 bits (154), Expect = 3e-28 Identities = 282/412 (68%), Gaps = 16/412 (4%) Strand=Plus/Plus Query 20931 TCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTC 20990 || || || || |||| ||||| || || |||| |||||||| | || ||||| | Sbjct 8113 TCGACATGATTTCTGTAGACGTGAGCATCGCCCAGCGTGTGCACCAGTTCACCCGGACGC 8172 Query 20991 AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGG 21050 |||||||| | | || ||||| ||||| ||||| ||| ||||||||| || || Sbjct 8173 AGGCCCGTCGCCTTCGCAATCAGTATCGTCAAGAGGGAGTACGAGGCGATGTTGAAGGGC 8232 Query 21051 ACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCC-----CCCC 21105 || || ||||||||||| || | |||||||||| ||| || |||||| || Sbjct 8233 ACGCCAAGGCCCATGTCACACGAGCGCTGGTACAGCATGCATGAGAGCTCCGACTTTTCC 8292 Query 21106 GAG-CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCC 21164 | | |||||| ||||| | || | ||| ||||| || || |||||| | || | Sbjct 8293 GTGTTCACGTAGAACTGGCCCAGTAAGTGGCAAGGGGGCAGCGCCATCTTGGACAGCGCG 8352 Query 21165 GCGGGGTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATT-AG--- 21220 | |||||||||||| | | || || || |||| || | || || || Sbjct 8353 GACGGGTTCCACGCGATGAAGAGCATCCGACGGTCGTTTGG----ATTTTCTTTGAGCGT 8408 Query 21221 ATCCACCA-CGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCC 21279 | ||| | | | | | ||| ||||| |||| ||| ||||| || |||||| ||| Sbjct 8409 GTTCACGATCATCTTG-ATCTGATCCACGCCCTCACCTTCGTAATTCGCGTCGCAGCCCT 8467 Query 21280 TGTACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATC 21331 |||||||||| ||||| || | ||||||||| ||||| || || ||||| || Sbjct 8468 TGTACTCCGCGCCAAAGTGGCGCCACTGGAAGCCGTAGACTGGGCCCAGGTC 8519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427769660359680