Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptomonas_20seymouri_20[genbank_20GCA_5F001299535.1_202015-09-25] 1,216 sequences; 27,764,161 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq31 111 2e-19 >seq31 Length=128647 Score = 111 bits (122), Expect = 2e-19 Identities = 293/441 (66%), Gaps = 10/441 (2%) Strand=Plus/Minus Query 157373 TCTTCAACGCGTTTCATAAATATATCGGGAACCCATAAAGCGTTCATCAAATCACGCGCT 157432 |||||| | || ||||| || | ||||| ||||| | |||| | || ||||||||| Sbjct 107708 TCTTCA-CACGCTTCATGAACAGGTCGGGGACCCACAGGGCGTAGAACAGATCACGCGCA 107650 Query 157433 TTGGTGTCTTCGCTGCCAATGTTTCGACGCATGTGTAAAACGTCCATAATGTCGCAATGC 157492 ||| || |||| |||| || || | | | || | | |||||| ||| Sbjct 107649 CGCTGGTCGTCCTTGCCGGTGTTGCGCTTCAGGAGCAGAAAACCAAAGATGTCGGCGTGC 107590 Query 157493 CACGGTTCAACGTACACTGCTTGGGCTCCTTTTCGCTTGCCACCT---TGATCCACGTGA 157549 ||||| || | |||||| || || || || ||||| ||||| || ||||||| Sbjct 107589 CACGGCTCCAGGTACACGGCGAAAGCACCCTTGCGCTTACCACCACCCTGGTCCACGTAG 107530 Query 157550 CGCACCATATTATTAAAAACTCGCAGCATTGGTAGCAGTCCGCTGGCGGTGCCGTTCGTA 157609 || | | || || || || |||||||| |||| || |||| | | ||||||||||| Sbjct 107529 CGGGCGGTGTTGTTGAACACACGCAGCATCGGTACCAATCCGTTCGACGTGCCGTTCGTG 107470 Query 157610 GATTTTATTTTGCTGTTGCGGC--CGCGTACGCTGTTCACGTTCAATCCAATACCGCC-G 157666 || | ||| | | || |||| | ||| ||||| || ||||| ||||| | Sbjct 107469 CCGGCAATGTAGCT--TCCAGCAGCGCGGATATTGTGCACGTGCAGGCCAATGCCGCCCG 107412 Query 157667 CCGTGTTTAGAGATCATGGCGCAATCGTTTAATGTGTTATAGATGCCGCGAATGCTATCG 157726 ||| ||| ||| | ||| || || || | |||| || |||||| ||||| ||| Sbjct 107411 CCGC-TTTGCTGATGACGGCACACTCCTTCAGGGTGTCGTAAATGCCGTCGATGCTGTCG 107353 Query 157727 CTTTCCATGGTCAATAGAAAACATGAACTCATCTGCGGAGTCAGACTGCCGGCAGCGAAC 157786 | ||||| || | || || || ||||||||||| || | ||||||| ||| Sbjct 107352 TCCTTCATGGCCACCAAGAAGCACGAGCTCATCTGCGGCTTCGGCGTGCCGGCGTTGAAG 107293 Query 157787 ATGGTTGGGCTTGCGTGCGTG 157807 | |||||| | ||||||||| Sbjct 107292 AGGGTTGGCGTGGCGTGCGTG 107272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507006693381120