Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptomonas_20seymouri_20[genbank_20GCA_5F001299535.1_202015-09-25] 1,216 sequences; 27,764,161 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq31 259 1e-63 >seq31 Length=128647 Score = 259 bits (286), Expect = 1e-63 Identities = 537/780 (69%), Gaps = 32/780 (4%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 |||||||||||||||||||| | | ||| || || || | || || |||||| || Sbjct 107270 TTCACGCACGCCACGCCAACCCTCTTCAACGCCGGCACGCCGAAGCCGCAGATGAGCTCG 107329 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| | | ||||||||||| |||||| || || | ||||| || ||| | Sbjct 107330 TGCTTCTTGGTGGCCATGAAGGACGACAGCATCGACGGCATTTACGACACCCTGAAGGAG 107389 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGG--TGTATCGATCCACAATGTTCGTG 363724 ||||| | || ||| || ||||| ||||| || | || | |||||| | || | Sbjct 107390 TGTGCCGTCATCAGCAAAGCGGCGGGCGGCATTGGCCTGCA-CG-TGCACAATATCCGCG 107447 Query 363725 CA-CAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783 | | | | || |||||| |||||| || ||||| || |||| || ||||| Sbjct 107448 CTGCTGGA-AGCTACATTGCCGGCACGAACGGCACGTCGAACGGATTGGTACCGATGCTG 107506 Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843 |||||||| |||| || || | ||||| ||||||||||| || |||||||| || || Sbjct 107507 CGTGTGTTCAACAACACCGCCCGCTACGTGGACCAGGGTGGTGGTAAGCGCAAGGGTGCT 107566 Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA- 363902 || || |||| || ||||| || ||||| || |||| ||||| ||||| ||| Sbjct 107567 TTCGCCGTGTACCTGGAGCCGTGGCACGCCGACATCTTTGGTTTTCT---GCTCCTGAAG 107623 Query 363903 --AAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCT 363960 ||||| || || || || |||||| |||||||||||||| || || ||||| | Sbjct 107624 CGCAACACCGGCAAGGACGACCAGCGTGCGCGTGATCTGTTCTACGCCCTGTGGGTCCCC 107683 Query 363961 GACCATTTTATGAAGCGCGTGGAGGCAGGTAA--GAATTGGTCACTCTTTTGCCCACACG 364018 |||| || |||||||| ||| || || || ||| ||| | || | ||| ||| Sbjct 107684 GACCTGTTCATGAAGCGTGTGAAG--AGCGAAGGGAAGTGGACGCTGATGGACCCGAACG 107741 Query 364019 AATGTCCAGGTCTTTCCGA-TGTATG---GGGTGACGACTATGTTGCTCTATACGAAAAG 364074 ||||| || ||| || || || || || || | | ||||| || Sbjct 107742 CCTGTCC-GGGCTT---GAGTGACTGCTACGGCGAGGAGTTCGAGCGCCTATATGAGCGC 107797 Query 364075 TATGAATCGGAGGG-AAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCAT 364133 || || ||||||| ||| | |||| |||| || ||| || | ||||| || || Sbjct 107798 TACGAGGCGGAGGGCCGTGGCGTG-CAGACTATTCAGGCGCAGGAGGTGTGGTTCGCTAT 107856 Query 364134 CATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCG 364193 | | || |||||||||||||| || || | || ||||||| || |||||||| | Sbjct 107857 CCTCGAGTCGCAGATTGAGACGGGCGTGCCGTTCATCCTGTACAAGGACGCGTGCAACGG 107916 Query 364194 CAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGC---AACCTATGTACCGAGAT 364250 |||||| |||||| || |||| || || | ||| || || ||||| ||||| ||||| Sbjct 107917 CAAGTCGAACCAGAAGAACCTCGGCACCA-TCA--AGTGCTCGAACCTGTGTACGGAGAT 107973 Query 364251 TATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCC 364310 |||| |||||| | || || ||||| ||||| || |||||||| || |||||||| || Sbjct 107974 AGTTGAGTACACCTCGCCGGAGGAGACCGCCGTGTGCAACCTTGCCTCCATCGCGCTACC 108033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303333293750912