Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptomonas_20seymouri_20[genbank_20GCA_5F001299535.1_202015-09-25] 1,216 sequences; 27,764,161 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq31 239 4e-58 seq14 143 3e-29 seq24 138 1e-27 >seq31 Length=128647 Score = 239 bits (264), Expect = 4e-58 Identities = 1135/1778 (64%), Gaps = 53/1778 (3%) Strand=Plus/Minus Query 144733 ATGGGCCGCTGGCTTGGTGCGCAAATAGTACATGCCCGTTTTGAGTCCCGAGCGCCAAGT 144792 || ||| || | ||| ||||||| ||||||| || || ||||| || | ||| || Sbjct 108925 ATCGGCAGCCGCCTTCGTGCGCAGGTAGTACACACCGGTCTTGAGGCCACACTCCCAGGT 108866 Query 144793 GTAGTCGTGTATCGACGTCATCAGAGCGTACGTGGGCTCCGCCACAAACAAATTTAGCGA 144852 |||| | |||||||| ||| | | | ||||| | | || |||| || ||||| Sbjct 108865 GTAGAAAAGCATCGACGTGATCTGGCCAGAGGTGGGGTTCTGCAGGAACAGGTTCAGCGA 108806 Query 144853 TTGGCTTTGATCAATGAAAGCGTTGCGGTCGGCGGCCATCTCAATCATACGTTTGCATTT 144912 || ||| |||||| | ||||||| |||||| || |||| | |||| | Sbjct 108805 CTGCGATTGGTCAATGTACTGACCGCGGTCGCGGGCCATGTCGATCA---GCTTGCGCTG 108749 Query 144913 C---ATTTCCCAAGCGGTCTTGTACAAACGTTTAATGTGGTCCGGAATGCCGTCAATCGC 144969 || ||||| |||| ||| | |||| || | || |||||||| || | Sbjct 108748 AGGGATCTCCCACACGGTGCGGTAGAGCTCCTTAAGGTCTTGGGGGATGCCGTCGATAGA 108689 Query 144970 CTGAATCGACCCCTTGTGCGCAAATATGGCGTTCCGCATT-TCGGACGTGT-ACAGTTTT 145027 | || ||||| || | | || || | || ||||| || ||| ||||| Sbjct 108688 CAAGATAGACCCGTTTAGGGTAATAATTTCATTGCGCATCGTCT--CGTTCCACAGTCCG 108631 Query 145028 AACTTGATCAAGTCGTCAATTAAGTACTGATTGACGACCTGAAACTCGCCGGCCAACACA 145087 |||||| | ||| | | |||| ||||| ||| | ||||||||| || |||| Sbjct 108630 CGCTTGATGAGGTCCATCACGAGATACTTGTTGACCACCGGGAACTCGCCGCTCAGCACA 108571 Query 145088 CGACGCAAATACACGTTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGA 145147 || |||| || | ||| ||||||||||| || || ||||||| ||||| || || || Sbjct 108570 CGGCGCACGTAGATGTTGGACGTGAAGGGCTCGAAGCACTCGTTGTTGCCGAGAATCTGC 108511 Query 145148 GCGGTCGTTGCGGTGGGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTG 145207 | ||| | || || ||||| |||| || | || ||||||| ||| || | | Sbjct 108510 GAGGTGGACGCTGTCGGCATCGGGGCCAGCAGAAGGGAGTTGCGCATACCGGTCTGCATC 108451 Query 145208 ATGTCTTCCTTTAGCGTACCCCAATCCCATAGCGAAGT---CGGCCTCACGTCC---CAC 145261 | | ||||| || | |||| ||||| | | | ||| | || | ||| Sbjct 108450 ACCTTCTCCTTGAGGCTGTCCCAGTCCCAGCGGCCACTGTTCGGGCGGGGGTTCTTCCAC 108391 Query 145262 ATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCC 145321 |||||| |||||| |||||||| |||||| |||||||| | |||| ||| |||| Sbjct 108390 ATGTCGAACTGCAGAATGCCCTGGCTGGCCGGGCTGCCCTTGAAGGTCTCGTACGCGCCC 108331 Query 145322 CAAGTTTTGGCGAGCTCGCAACTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATT 145381 || || | ||| | ||||||| ||| | || || || ||||| || Sbjct 108330 TCCTCCTTCGCCATCTCCATAGATGCCTCCACCGCGGCAAAGTAGATCGTCTCAAAGATC 108271 Query 145382 TGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCA 145441 | | || | | || ||| || ||||| | | |||| |||||||| | || || Sbjct 108270 TCCGCATTCACCCGCTGCGCCTCGGCGCTCACAAAAGGCAGACGCAGCAGAATGAACGCG 108211 Query 145442 TCGGCGAGCCCCTGTATTCCCACGCCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCC 145501 || || || ||||| | || | ||| ||||| || | ||||||||| |||| Sbjct 108210 TCTGCCAGGCCCTGCACACCGAGGCCAATGGGGCGGTTGCGCATGTTGCTGCGAAGCGCC 108151 Query 145502 GACTCGATAGGATATCGATTACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTT 145561 | ||| | || || || |||||||| | |||| ||| || | ||| Sbjct 108150 GTCTCAACGGGGTAGTAGTTGCGGTCGATCACACGGTTCAGGTTGCGTGTGATCTGCTTC 108091 Query 145562 GTAA---TGTGCCGCAACTTTTCAAAG---TCAAACCGAGCCTCGTCAACGACCACACAG 145615 || | ||| ||| ||| | | | ||| | |||||||| |||| || Sbjct 108090 GTGACAGTGTAGAGCAGCTTGTGATCGATCTCACGCTTCGCCTCGTCGACGA------AG 108037 Query 145616 CTATTGACGGCGATCGACGCCAAATTACAAACTGCCGTCTCCTC-GGCGTCGCTGTATTG 145674 | | ||||| || || | || || || || |||||||| |||| | |||| | Sbjct 108036 CGGGGTAGCGCGATGGAGGCAAGGTTGCACACGGCGGTCTCCTCCGGCGAGG-TGTACTC 107978 Query 145675 TACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTT 145734 || ||||| | |||| || || |||||||| || || || | ||| || || Sbjct 107977 AACTATCTCCGTACACAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTT 107918 Query 145735 CCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCAC 145794 | |||||||||||||||||| || ||| |||| |||| ||||| | ||||| ||| | Sbjct 107917 GCCGTTGCACGCGTCCTTGTACAGGATGAACGGCACGCCCGTCTCAATCTGCGACTCGAG 107858 Query 145795 GATAA--AACGGTGCAAGTCCTGCGCACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCG 145852 |||| ||| || |||||||| | | |||| | |||||||| | ||| Sbjct 107857 GATAGCGAACCA--CACCTCCTGCGCCTGAATAGTCTGCACGCCACGGCCCTCCGCCTCG 107800 Query 145853 TATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTG 145912 || | || || ||| ||| | |||||||| || || ||| ||||| | Sbjct 107799 TAGCGCTCATATAGGCGCTCGAACTCCTCGCCGTAGCAGTCACTCAAGCCCGGACAGGCG 107740 Query 145913 TTGGGACACATCAGCGACCATACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGC 145972 || || |||||||| ||| || | | || || |||| ||| |||| || || Sbjct 107739 TTCGGGTCCATCAGCGTCCACTTCCCTTCGCTCTTCACACGCTTCATGAACAGGTCGGGG 107680 Query 145973 ACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTC 146032 |||||||| ||||| | || || ||||| || || || |||| |||||| Sbjct 107679 ACCCACAGGGCGTAGAACAGATCACGCGCACGCTGGTCGTCCTTGCCGGTGTTGCGCTTC 107620 Query 146033 AAATTAAGCACACTATAGATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCT 146092 | || | || | ||||||| ||||||||||| || | || ||||||| || || Sbjct 107619 AGGAGCAGAAAACCAAAGATGTCGGCGTGCCACGGCTCCAGGTACACGGCGAAAGCACCC 107560 Query 146093 TTTCGTTT---GCCACCCTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATG 146149 || || || |||||||||||||||| || | ||||||| || || |||| ||| Sbjct 107559 TTGCGCTTACCACCACCCTGGTCCACGTAGCGGGCGGTGTTGTTGAACACACGCAGCATC 107500 Query 146150 GGCTCGACGCCGCTGGCTACGCCGTTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACG 146209 || | | ||| | | ||||||||| | || | | || | ||| | Sbjct 107499 GGTACCAATCCGTTCGACGTGCCGTTCGTGCCGGCAATGTAGCTTCCAGCAGCGCGGATA 107440 Query 146210 CAATGAACATTCACGCCGAGACCG-CCGCCGTACTTGGAT-ATAGCGGCGCAGTCGCCGA 146267 || || | || ||| | ||| |||||| ||| | | || |||| || || | Sbjct 107439 TTGTGCACGTGCAGGCCAATGCCGCCCGCCG--CTTTGCTGATGACGGCACACTCCTTCA 107382 Query 146268 GCGTCTCGTAGATGCCGTCAATGCTATCG--CTTCGAATGCCGAGCAGAAAGCACGAGCA 146325 | || ||||| |||||||| ||||| ||| |||| ||| | | || |||||||||| Sbjct 107381 GGGTGTCGTAAATGCCGTCGATGCTGTCGTCCTTC--ATGGCCACCAAGAAGCACGAGCT 107324 Query 146326 CATCTGCGCCATCGGCGTCCCCGCCGAGAACAACGTCGGGCTCGCGTGCGTAAACATT-- 146383 |||||||| | ||||||| || || ||| | || || | |||||||| || | | Sbjct 107323 CATCTGCGGCTTCGGCGTGCCGGCGTTGAAGAGGGTTGGCGTGGCGTGCGTGAAGAATCC 107264 Query 146384 TTTCGGC-TCATCATCCGATACGTTTCGATAGCG-TCTTGAATGTCGTCGCCATGAATGC 146441 |||| | ||| || || ||||| ||| || |||| || || | || |||| Sbjct 107263 CTTCGACATCA--ATTCG-TACGTCTCGCGCACGTTCTTCAA-ATCCCTGAGGTGGATGC 107208 Query 146442 CCAAAGCGACGCGCATGAGCATGTGTTGGGGCCGCTCC 146479 | | |||||| |||| || || || || ||||||||| Sbjct 107207 CGAGAGCGACACGCAGGAACAACTGCTGCGGCCGCTCC 107170 >seq14 Length=160581 Score = 143 bits (158), Expect = 3e-29 Identities = 252/362 (70%), Gaps = 4/362 (1%) Strand=Plus/Plus Query 46240 ATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGAC 46299 |||||||| ||||| || ||||||||||| || ||||| |||||||||||||| |||||| Sbjct 143410 ATGCCCGGGCTGACCTTCAGCAACGAGCTCATCTCGCGTGACGAGGGCCTGCACACGGAC 143469 Query 46300 TTTGCGTGTCTCTACTATAACACTCGCGTGCACGACAAGCTTGCGCCCGACACCGTGCTG 46359 || ||||| ||| ||| || | | | | | ||||||| | | || ||| ||| Sbjct 143470 TTCGCGTGCCTCCTCTACGACTCGCACATCAAGCACAAGCTGCCCCGTGAGCGCGTTCTG 143529 Query 46360 AGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCT 46419 || || ||| |||||| ||||||| ||||| | | ||| ||||| | | Sbjct 143530 GAGATCATCGTGGACGCGGTGAACATTGAGCGCGAGTTCATCTGCGACGCGCTGCCTG-T 143588 Query 46420 GC-CCTGCTGGGCATGAACGCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCG 46478 || || | ||||||||||| | |||| | |||||||||||||| |||||||| Sbjct 143589 GCGGTTGGTCGGCATGAACGCGGACCTGATGTCGCAGTACATCGAGTTTGTGGCGGACCG 143648 Query 46479 ACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTCACGCG-CGCAATCCATTTGAGTTTA 46537 ||||| ||| ||| | |||||| | ||| | ||| | || || || || | Sbjct 143649 GCTGCTTGTGTCGCTGGGGCTCGAGAAGCACTACAACGTGACGC-AGCCGTTCGACTTCA 143707 Query 46538 TGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTATA 46597 || | | ||||| ||| | ||||| || || || ||||| ||| ||||| |||||| Sbjct 143708 TGGAGATGATCTCGCTGCAAGGCAAGACGAACTTCTTCGAGAAGAAGGTCGGTGAGTATC 143767 Query 46598 AG 46599 || Sbjct 143768 AG 143769 >seq24 Length=140537 Score = 138 bits (152), Expect = 1e-27 Identities = 251/362 (69%), Gaps = 4/362 (1%) Strand=Plus/Plus Query 46240 ATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGAC 46299 |||||||| ||||| || ||||||||||| || ||||| |||||||||||||| |||||| Sbjct 186 ATGCCCGGGCTGACCTTCAGCAACGAGCTCATCTCGCGTGACGAGGGCCTGCACACGGAC 245 Query 46300 TTTGCGTGTCTCTACTATAACACTCGCGTGCACGACAAGCTTGCGCCCGACACCGTGCTG 46359 |||||||| || ||| || | | | | | ||||||| | | || ||| ||| Sbjct 246 TTTGCGTGCCTGCTCTACGACTCGCACATCAAGCACAAGCTGCCCCGTGAGCGCGTTCTG 305 Query 46360 AGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCT 46419 || || ||| || ||| ||||||| ||||| | | ||| ||||| | | Sbjct 306 GAGATCATCGTGGATGCAGTGAACATTGAGCGCGAGTTCATCTGCGACGCGCTGCCTG-T 364 Query 46420 GC-CCTGCTGGGCATGAACGCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCG 46478 || ||| | ||||||||||| | |||| | |||||||||||||| || ||||| Sbjct 365 GCGGCTGATCGGCATGAACGCTGAACTGATGTCGCAGTACATCGAGTTTGTGGCAGACCG 424 Query 46479 ACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTCACG-CGCGCAATCCATTTGAGTTTA 46537 ||||| ||| ||| | |||||| | ||| |||| | || || || || | Sbjct 425 GCTGCTTGTGTCGCTGGGGCTCGAGAAGCACTACAACGTGGCGC-AGCCGTTCGACTTCA 483 Query 46538 TGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTATA 46597 || | | ||||| ||| | ||||| || || || ||||| ||| ||||| |||||| Sbjct 484 TGGAGATGATCTCGCTGCAAGGCAAGACGAACTTCTTCGAGAAGAAGGTCGGTGAGTATC 543 Query 46598 AG 46599 || Sbjct 544 AG 545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472005625405440