Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptomonas_20seymouri_20[genbank_20GCA_5F001299535.1_202015-09-25] 1,216 sequences; 27,764,161 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq31 134 1e-26 >seq31 Length=128647 Score = 134 bits (148), Expect = 1e-26 Identities = 283/413 (69%), Gaps = 17/413 (4%) Strand=Plus/Minus Query 129990 CATCAAACTCCACATTCCATC-CGCTTCGACTCGTTTCATAAACAAATCGGGTACCCACA 130048 ||||| ||||| | || || | |||| || || ||||| |||| ||||| ||||||| Sbjct 107731 CATCAGCGTCCACTTCCCTTCGCTCTTC-ACACGCTTCATGAACAGGTCGGGGACCCACA 107673 Query 130049 GGGCGTACAACAAATCTCG----CGCTTTTCTATCCTCGGCACCCATGTTACGTTTCAGT 130104 ||||||| |||| ||| || |||| || |||| | || |||| || ||||| Sbjct 107672 GGGCGTAGAACAGATCACGCGCACGCTGGTC-GTCCTTG---CCGGTGTTGCGCTTCAGG 107617 Query 130105 TCAAGGAAATCGTAAATGTCGGCGTGCCACGGTTCAACATAAATTGCCATTGCGCCCTTC 130164 || ||| | | ||||||||||||||||| || | || | || | || ||||| Sbjct 107616 AGCAGAAAACCAAAGATGTCGGCGTGCCACGGCTCCAGGTACACGGCGAAAGCACCCTTG 107557 Query 130165 CGTTT---GCCCCCTTGGTCAACGTGGCGCACGGCATTGTTGTAGACTCGCAACATTGCC 130221 || || || || ||||| |||| ||| ||| |||||| | || |||| ||| | Sbjct 107556 CGCTTACCACCACCCTGGTCCACGTAGCGGGCGGTGTTGTTGAACACACGCAGCATCGGT 107497 Query 130222 TCCAATCCGTTGGCCGTGCCGTTTGTGCTCTCAATGAAACTGCCACGAGCCCGAACGTTA 130281 |||||||||| | ||||||||| |||| ||||| | || ||| ||| || | || Sbjct 107496 ACCAATCCGTTCGACGTGCCGTTCGTGCCGGCAATGTAGCTTCCAGCAGCGCGGATATTG 107437 Query 130282 TGAACGCTTAGACCTATGCCG-CCGCCAAATTTTGAT-ATCAACGCGCAATCGCGTAGCG 130339 || ||| || || |||||| ||||| |||| | || | || || || || | Sbjct 107436 TGCACGTGCAGGCCAATGCCGCCCGCC--GCTTTGCTGATGACGGCACACTCCTTCAGGG 107379 Query 130340 TTTCATAAATGCCAACGATACTGTCTTCTTTAATGTTTAGGAGGAAACACGAG 130392 | || |||||||| |||| ||||| || || ||| | | ||| |||||| Sbjct 107378 TGTCGTAAATGCCGTCGATGCTGTCGTCCTTCATGGCCACCAAGAAGCACGAG 107326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419721779631040