Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptomonas_20seymouri_20[genbank_20GCA_5F001299535.1_202015-09-25] 1,216 sequences; 27,764,161 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq24 100 6e-16 seq14 91.5 3e-13 >seq24 Length=140537 Score = 100 bits (110), Expect = 6e-16 Identities = 156/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 243532 GAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGA 243591 || ||||| |||||||| | || ||||| || ||||||||| ||||||| ||| Sbjct 339 GAGTTCATCTGCGACGCGCTGCCTGTGCGGCTGATCGGCATGAACGCTGAACTGATGTCG 398 Query 243592 CAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTAC 243651 ||||||||||| || || || ||||| | | | |||| || ||||| ||| Sbjct 399 CAGTACATCGAGTTTGTGGCAGACCGGCTGCTTGTGTCGCTGGGGCTCGAGAAGCACTAC 458 Query 243652 AACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTC 243711 ||| | | || || | ||| |||||| | || ||||| ||||| || || |||||| Sbjct 459 AACGTGGCGCAGCCGTTCGACTTCATGGAGATGATCTCGCTGCAAGGCAAGACGAACTTC 518 Query 243712 TTCGAAAAGCGTGTCAGTGATTATCAACGCCCTGGTGTGATGA 243754 ||||| ||| ||| |||| ||||| |||| ||||||| Sbjct 519 TTCGAGAAGAAGGTCGGTGAGTATCAGAAGGCTGGCGTGATGA 561 >seq14 Length=160581 Score = 91.5 bits (100), Expect = 3e-13 Identities = 154/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 243532 GAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGA 243591 || ||||| |||||||| | || ||| | | ||||||||| | || || ||| Sbjct 143563 GAGTTCATCTGCGACGCGCTGCCTGTGCGGTTGGTCGGCATGAACGCGGACCTGATGTCG 143622 Query 243592 CAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTAC 243651 ||||||||||| || || || ||||| | | | |||| || ||||| ||| Sbjct 143623 CAGTACATCGAGTTTGTGGCGGACCGGCTGCTTGTGTCGCTGGGGCTCGAGAAGCACTAC 143682 Query 243652 AACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTC 243711 ||| | | | || || | ||| |||||| | || ||||| ||||| || || |||||| Sbjct 143683 AACGTGACGCAGCCGTTCGACTTCATGGAGATGATCTCGCTGCAAGGCAAGACGAACTTC 143742 Query 243712 TTCGAAAAGCGTGTCAGTGATTATCAACGCCCTGGTGTGATGA 243754 ||||| ||| ||| |||| ||||| |||||||||||| Sbjct 143743 TTCGAGAAGAAGGTCGGTGAGTATCAGAAGGCTGGTGTGATGA 143785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102862817129600