Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptomonas_20seymouri_20[genbank_20GCA_5F001299535.1_202015-09-25] 1,216 sequences; 27,764,161 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq24 116 4e-21 seq14 100 3e-16 >seq24 Length=140537 Score = 116 bits (128), Expect = 4e-21 Identities = 167/234 (71%), Gaps = 5/234 (2%) Strand=Plus/Minus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| || ||||||||||| |||||||| || || |||| ||| || Sbjct 250 GCAAAGTCCGTGTGCAGGCCCTCGTCACGCGAGATGAGCTCGTTGCTGAAGGTCAGCCCG 191 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 ||||| || || |||||||||| |||||| | ||| || || || ||||| ||||| || Sbjct 190 GGCATCAGCCCGCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCCCGAAAAGAATATG 131 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCT-CAGCAAAGGAGCGCGACTTTGTGTCAAA 126225 ||||| || ||||| | | || |||| | | || ||||| | || | | Sbjct 130 CCCTCTACCGCAGCGAAGCCGATCAGCCGCTCCTGGAAGCTAGCGCCGC----TGCCGAT 75 Query 126226 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 126279 ||| | ||||||| |||||| |||| ||| ||||||| ||||||||||| Sbjct 74 CCAACGTACAGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGGATCGC 21 >seq14 Length=160581 Score = 100 bits (110), Expect = 3e-16 Identities = 157/223 (70%), Gaps = 5/223 (2%) Strand=Plus/Minus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||| || ||||||||||| |||||||| || || |||| ||| || ||||| || || Sbjct 143463 GTGCAGGCCCTCGTCACGCGAGATGAGCTCGTTGCTGAAGGTCAGCCCGGGCATCAGCCC 143404 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||||| |||||| | ||| || || || || |||||||| || ||||| || Sbjct 143403 GCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCCGGAGAAGAATATGCCCTCAACCGC 143344 Query 126178 CGCGAACGCAAAGAGACGCT-CAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTCATCG 126236 ||||| | | || |||| | | || ||||| | | | | ||| || | Sbjct 143343 GGCGAAGCCGATCAGCCGCTCCTGGAAGCTCGCGCGGC----TCCCGATCCAACGCACAG 143288 Query 126237 CCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 126279 |||||| |||||| |||| | ||||||| |||||||| || Sbjct 143287 CCCACTCCGCCTTCTTCTGAACGCACGGGATCGTCTGGATTGC 143245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597344520225280