Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptomonas_20seymouri_20[genbank_20GCA_5F001299535.1_202015-09-25] 1,216 sequences; 27,764,161 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq31 226 3e-54 >seq31 Length=128647 Score = 226 bits (250), Expect = 3e-54 Identities = 886/1372 (65%), Gaps = 52/1372 (4%) Strand=Plus/Plus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 ||||| || ||||| |||||||| || || ||| ||| |||||| ||||| ||| || Sbjct 107279 GCCACGCCAACCCTCTTCAACGCCGGCACGCCGAAGCCGCAGATGAGCTCGTGCTTCTTG 107338 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 || | | |||| |||| |||| ||| |||| ||||| ||| ||||| ||||| | Sbjct 107339 GTGGCCATGAAGGACGACAGCATCGACGGCATTTACGACACCCTGAAGGAGTGTGCCGTC 107398 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 ||| ||| ||||| || || || | || ||| | | || || || | Sbjct 107399 ATCAGCAAAGCGGCGGGCGGCATTGGCCTGCACGTGCACAATATCCGCGCTGCTGGAAGC 107458 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 ||||| ||| || || ||||| || ||||| | || || ||||| || || |||||| Sbjct 107459 TACATTGCCGGCACGAACGGCACGTCGAACGGATTGGTACCGATGCTGCGTGTGTTCAAC 107518 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 ||| | || ||||||||||||||||||||||| | | | |||||| ||||||| || || Sbjct 107519 AACACCGCCCGCTACGTGGACCAGGGTGGTGGTAAGCGCAAGGGTGCTTTCGCCGTGTAC 107578 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAG---AACCACGGC 94248 || ||||| |||||||| ||| | | ||| | |||| ||| ||| |||| Sbjct 107579 CTGGAGCCGTGGCACGCCGACATCTTTGGTTTTCTGCTCCTG---AAGCGCAACACCGGC 107635 Query 94249 AACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308 || || || | || | || || |||||||| || ||||| || ||||| || ||| Sbjct 107636 AAGGACGACCAGCGTGCGCGTGATCTGTTCTACGCCCTGTGGGTCCCCGACCTGTTCATG 107695 Query 94309 AAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTG 94368 || || || ||| | |||| || | || || | ||||| || || Sbjct 107696 AAGCGTGTGAAGAGCGAAGGGAAGTGGACGCTGATGGACCCGAACGCCTGTCCGGGCTTG 107755 Query 94369 TCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAG 94428 ||| | || | || || | | |||| || ||||| || ||||| Sbjct 107756 AGTGACTGCTACGGCGAGGAGTTCGAGCGCCTATATGAGCGCTACGAGGCGGAGGGCCGT 107815 Query 94429 GCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAG 94488 | | | || ||| | || | || ||||| ||| | || ||| | ||| Sbjct 107816 GGCGTGCAGACTATTCAGGCGCAGGAGGTGTGGTTCGCTATCCTCGAGTCGCAGATTGAG 107875 Query 94489 ACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCAC 94548 ||||| ||| | |||| ||| ||||||| | ||||| |||||| |||||| || || Sbjct 107876 ACGGGCGTGCCGTTCATCCTGTACAAGGACGCGTGCAACGGCAAGTCGAACCAGAAGAAC 107935 Query 94549 CTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGAC 94608 ||||| |||||| ||||||| ||||| || ||||| || ||||| || || ||||| Sbjct 107936 CTCGGCACCATCAAGTGCTCGAACCTGTGTACGGAGATAGTTGAGTACACCTCGCCGGAG 107995 Query 94609 GAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTAC 94668 |||| || ||||| ||||| | ||||||| || || ||||| ||| | | | Sbjct 107996 GAGACCGCCGTGTGCAACCTTGCCTCCATCGCGCTACCCCGCTTCGT-CGACGAGGCGAA 108054 Query 94669 ACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACT-TCGCGGGAAG--GATGGTC 94725 ||| | |||||| || ||| | ||| || || ||| ||| Sbjct 108055 GCGTGA--------GATCGATCACAAGCTGCTC-TACACTGTCACG--AAGCAGATCACA 108103 Query 94726 TTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAA-CTC 94784 ||||||||| | || |||||| |||| ||||||||| ||| ||| | | | Sbjct 108104 CGCAACCTGAACCGTGTGATCGACCGCAACTACTACCCCGTT---GAGACGGCGCTTCGC 108160 Query 94785 A--AACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTG 94842 | ||| || | || ||||| ||| |||| || ||||| | || |||||| | | Sbjct 108161 AGCAACATGCGCAACCGCCCCATTGGCCTCGGTGTGCAGGGCCTGGCAGACGCGTTCATT 108220 Query 94843 ATGATGCGTCTGCCCTACGACTCTGTCGACGCG--GCGGGTTTGAATTTGAACATATTCG 94900 || |||||||||| | | | ||| ||| |||||| |||| | | || || | Sbjct 108221 CTGCTGCGTCTGCCTTTTGTGAGCGCCGAGGCGCAGCGGGT--GAATGCGGAGATCTTTG 108278 Query 94901 AAAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGC 94960 | | || || | | || || | ||| | | |||| | ||| |||| | Sbjct 108279 AGACGATCTACTTTGCCGCGGTGGAGGCATCTATGGAGATGGCGAAGGAGGAGGGCGCGT 108338 Query 94961 CACACGAATCGTTCCGCGGATCGCCCTTGGAAC-AGGGCATTTTTCAGTTCGACCTCTGG 95019 |||| | ||| || |||| | | |||||||| | ||||||||| | ||| Sbjct 108339 ---ACGAGACCTTCAAGGGCA-GCCCGGCCAGCCAGGGCATTCTGCAGTTCGACATGTGG 108394 Query 95020 GGTGTGAAGCCCT---CG------GGTCTGTACGACTGGGA-AGC-TCTACGCGCTGATG 95068 ||| ||| || || | | |||||||| ||| || | | | | || Sbjct 108395 AA---GAACCCCCGCCCGAACAGTGGCCGCTGGGACTGGGACAGCCTCAAGGAGAAGGTG 108451 Query 95069 TTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGG 95128 | || || |||| || ||| | || || ||||||| ||||| || || ||||| Sbjct 108452 ATG-CAGAC-CGGTATGCGCAACTCCCTTCTGCTGGCCCCGATGCCGACAGCGTCCACCT 108509 Query 95129 CGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGC 95188 ||||||| || ||||||||||||| ||||| |||||||| |||||| | ||| | | Sbjct 108510 CGCAGATTCTCGGCAACAACGAGTGCTTCGAGCCCTTCACGTCCAACATCTACGTGCGCC 108569 Query 95189 GGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCT 95240 | ||||| ||| || ||||| || |||||||| | ||| | |||||| Sbjct 108570 GTGTGCTGAGCGGCGAGTTCCCGGTGGTCAACAAGTATCTCGTGATGGACCT 108621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494715680207360