Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptomonas_20seymouri_20[genbank_20GCA_5F001299535.1_202015-09-25] 1,216 sequences; 27,764,161 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq14 131 2e-25 >seq14 Length=160581 Score = 131 bits (144), Expect = 2e-25 Identities = 298/442 (67%), Gaps = 10/442 (2%) Strand=Plus/Plus Query 47143 TGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTC-GGGCAGCTTTGCGGCGATATTT 47201 |||||| |||||| || |||||| | |||||||| ||| | | |||| || | || Sbjct 143330 TGATCGGCTTCGCCGCGGTTGAGGGCATATTCTTCTCCGGGTCGTTCTGCG-CGCTGTTC 143388 Query 47202 TACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGA 47261 | |||| | || | |||||||| || || || ||||||||||| |||||| | Sbjct 143389 TGGCTGAAGAAGCGCGGGCTGATGCCCGGGCTGACCTTCAGCAACGAGCTCATCTCGCGT 143448 Query 47262 GACGAAGGCCTGCACACCAACTTTGCCTGTCTCTACTACAACACTAGAGTCGATCAAAAG 47321 ||||| ||||||||||| |||| || || ||| |||| || | || | || ||| Sbjct 143449 GACGAGGGCCTGCACACGGACTTCGCGTGCCTCCTCTACGACTCGCACATCAAGCACAAG 143508 Query 47322 TTG-GACGTGCCCACCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTT 47380 || |||| | | || | || || | | || || || ||||||| ||||| Sbjct 143509 CTGCCCCGTGAGCGCGTTCTG-GAGATCATCGTGGACGCGGTGAACATTGAGCGCGAGTT 143567 Query 47381 TTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTA 47440 || ||| || ||||| | || || || ||||||||||| ||||| |||| Sbjct 143568 CATCTGCGACGCGCTGCCTGTGCGGTTGGTCGGCATGAACGCGGACCTGATGTCGCAGTA 143627 Query 47441 CATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACAC 47500 |||||| ||||| || ||||| ||||| || ||| | | | ||| || ||| Sbjct 143628 CATCGAGTTTGTGGCGGACCGGCTGCTTGTGTCGCT---GGGGCTCGAGAAGCACTACAA 143684 Query 47501 CGAGA---ATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTT 47557 || || | || ||||| || ||| | | || ||||| | |||||||| ||||| || Sbjct 143685 CGTGACGCAGCCGTTCGACTTCATGGAGATGATCTCGCTGCAAGGCAAGACGAACTTCTT 143744 Query 47558 CGAGAAGCGCGTCGGCGAATAT 47579 ||||||| ||||| || ||| Sbjct 143745 CGAGAAGAAGGTCGGTGAGTAT 143766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475493572387840