Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptomonas_20seymouri_20[genbank_20GCA_5F001299535.1_202015-09-25] 1,216 sequences; 27,764,161 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq24 107 2e-18 seq14 95.1 1e-14 >seq24 Length=140537 Score = 107 bits (118), Expect = 2e-18 Identities = 271/400 (68%), Gaps = 18/400 (5%) Strand=Plus/Minus Query 127362 ACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTT-ACATGGGAGCGCG 127420 |||| ||||||| |||||| |||| |||||| ||||| || ||| || |||||| Sbjct 411 ACTCGATGTACTGCGACATCAGTTCAGCGTTCATGCCGATCAGCCGCACA-GGCAGCGCG 353 Query 127421 TCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGTGAATAGTGTCC 127480 || |||||||| | |||||||| ||| || ||| | ||| | ||| | | | Sbjct 352 TCGCAGATGAACTCGCGCTCAATGTTCACTGCATCCACGATGATCTCCAGAAC-GCGCTC 294 Query 127481 ACCC--CAGGTCTATTGCGTAAAGTC----TTGAAGAGTTC-CACAGCAAACTCTTGGTG 127533 || ||| || ||| | | || | | |||| ||| ||||| || ||| Sbjct 293 ACGGGGCAG--CTTGTGCTTGATGTGCGAGTCGTAGAGCAGGCAC-GCAAAGTCCGTGTG 237 Query 127534 GAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCG 127593 || ||||||||||| |||||||| || || |||| ||| || ||||| || || || Sbjct 236 CAGGCCCTCGTCACGCGAGATGAGCTCGTTGCTGAAGGTCAGCCCGGGCATCAGCCCGCG 177 Query 127594 CTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGC 127653 |||||||| |||||| | ||| || || || || || ||||| || ||||| || || Sbjct 176 CTTCTTCAGCCAGAACAGCGCGCAGAACGACCCCGAAAAGAATATGCCCTCTACCGCAGC 117 Query 127654 GAACGCAAATAGACGCT-CGGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGCCC 127712 ||| | | || |||| | | || |||| || ||| ||| | || |||| Sbjct 116 GAAGCCGATCAGCCGCTCCTGGAAGCTAGCGCCGCTGCCGATCCAAC--GTACA--GCCC 61 Query 127713 ACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC 127752 ||| ||||| |||| ||| || |||| ||||||||||| Sbjct 60 ACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGGATCGC 21 >seq14 Length=160581 Score = 95.1 bits (104), Expect = 1e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 ||| || ||||||||||| |||||||| || || |||| ||| || ||||| || || Sbjct 143463 GTGCAGGCCCTCGTCACGCGAGATGAGCTCGTTGCTGAAGGTCAGCCCGGGCATCAGCCC 143404 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 127647 |||||||||| |||||| | ||| || || || || |||||||| || ||||| || Sbjct 143403 GCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCCGGAGAAGAATATGCCCTCAAC 143347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613497874690560