Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptomonas_20seymouri_20[genbank_20GCA_5F001299535.1_202015-09-25] 1,216 sequences; 27,764,161 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq14 105 8e-18 seq24 93.3 5e-14 >seq14 Length=160581 Score = 105 bits (116), Expect = 8e-18 Identities = 185/268 (69%), Gaps = 5/268 (2%) Strand=Plus/Plus Query 102054 GACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTT 102113 |||| ||| || | ||| | | |||||| || ||| | | || ||||| || | Sbjct 143200 GACACGTACATCACGGACAGCGAGGAGAAGCTGCGGCTGCTGCACGCAATCCAGACGATC 143259 Query 102114 CCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCC 102173 || || |||| ||||| ||||| |||||| || ||| ||| || |||| Sbjct 143260 CCGTGCGTTCAGAAGAAGGCGGAGTGGGCTGTGC----GTTGGATCGGGAGCCGCGCGAG 143315 Query 102174 TTTGCTG-AGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTT 102232 || | | |||| || ||| || || |||||||| || |||||||| || || || Sbjct 143316 CTTCCAGGAGCGGCTGATCGGCTTCGCCGCGGTTGAGGGCATATTCTTCTCCGGGTCGTT 143375 Query 102233 CTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 102292 |||||| | | ||||| |||||||| || || ||||| || || |||| |||||| Sbjct 143376 CTGCGCGCTGTTCTGGCTGAAGAAGCGCGGGCTGATGCCCGGGCTGACCTTCAGCAACGA 143435 Query 102293 GCTTATCTCTCGTGACGAGGGACTCCAC 102320 ||| ||||| ||||||||||| || ||| Sbjct 143436 GCTCATCTCGCGTGACGAGGGCCTGCAC 143463 >seq24 Length=140537 Score = 93.3 bits (102), Expect = 5e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 102263 || ||||| || ||||| || || || |||||||| | | ||||| |||||||| || Sbjct 123 GTAGAGGGCATATTCTTTTCGGGGTCGTTCTGCGCGCTGTTCTGGCTGAAGAAGCGCGGG 182 Query 102264 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAA 102323 || ||||| || || |||| ||||||||| ||||| ||||||||||| || ||| Sbjct 183 CTGATGCCCGGGCTGACCTTCAGCAACGAGCTCATCTCGCGTGACGAGGGCCTGCACACG 242 Query 102324 GAGTTTGCG 102332 || |||||| Sbjct 243 GACTTTGCG 251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620732964715520